PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX88234.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 1057aa MW: 118656 Da PI: 7.7213

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX88234.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.7	1.3e-08	503	547	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g+WT eEd l+ v+ +G ++W Ia+ +g+ Rt+ qc r+q RDX88234.1 503 GSWTNEEDRSLLLIVQDMGIRNWFNIAASLGTSRTPFQCLARFQR 547 79***************************************9995 PP
2	Myb_DNA-binding	37.2	7e-12	557	599	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT+eEd +l av+ +G +W ++a+ + +Rt+ qc +rw k RDX88234.1 557 EWTEEEDAQLCSAVACFGDSNWQSVASVLE-RRTGTQCSNRWKK 599 7***************************.*********98 PP
3	Myb_DNA-binding	38.4	2.8e-12	606	649	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T +Ed +l av ++G + W++Ia++++ gR qc++r+++ RDX88234.1 606 KGSFTRDEDIRLTVAVMLFGRK-WNLIAKYVP-GRIQSQCRDRYLN 649 799***************99.*****.*********98 PP
4	Myb_DNA-binding	48.7	1.7e-15	659	700	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT+eEd++l a++++G W++Ia++++ Rt+ qc+ rw RDX88234.1 659 GWTEEEDLRLEAAIAKHGYC-WSKIAEEVP-PRTDSQCRKRWKV 700 5***************99.*****.9********86 PP

Sequence ? help Back to Top
Protein Sequence Length: 1057 aa Download sequence
MSGGPRPSPK GKSATKGGRK KSRTPSCRPS QSNYFRSYKN TRQLKPITFT SFKHTLSHPH 60 TLYVKTRRNP NNSNPMTPRV DDYEKDNLSA TDDDDDDDDG LKEDMAALAR ACLIGAPRAD 120 DSVPTEDPLL DAGDAVVPAA TDSDDDQDDF ECLKRVQSLY TPLSSLPPLP PEPAVSDDDD 180 VDDLETVRAI MRRLNTYGEG PHEGGMETLA DEGDQTSSPG CGGDIANGSI HYESDGGELC 240 PVSQDPNEAA TKELAENIEM QLSDFVESSE PDACESSKLP QKRMSFPPAV ETFVDAIKKN 300 RDLQRFLRSK LIALEAKIEE NKQIRNKIKI LKDFQASCTR RTGSALSLKK DPCVQLISAK 360 KSSAPKNTKK HKKVSAMCYG PEENSRVANY RMVLERYPLS LDRKKWSNVE RENLLKGIKQ 420 QFQEMVLQVS VDRISSEGSF GDANDMDNIL ASVRNLEIRP ERIREFLPKV NWDQLASMYV 480 AGRTGAECES RWLNCEDPLI NQGSWTNEED RSLLLIVQDM GIRNWFNIAA SLGTSRTPFQ 540 CLARFQRSLN PSMLNSEWTE EEDAQLCSAV ACFGDSNWQS VASVLERRTG TQCSNRWKKA 600 LCPERKGSFT RDEDIRLTVA VMLFGRKWNL IAKYVPGRIQ SQCRDRYLNS LDPSLKWGGW 660 TEEEDLRLEA AIAKHGYCWS KIAEEVPPRT DSQCRKRWKV LCPEQVPLLQ EAKKKQRSII 720 GSNFVDRESE RPTITLDDFL PLRALAPKSD VGASNLRKKD KSSIVPKKMS SKKRAKRTRL 780 RTKEVQDTEV NCDDEIKTCG EEVQVSACSN VGKRMRFKRR ANNTRSCPKE VVETTCSDMV 840 KTCIESSESQ DSDDMTLACF LRNISKKRLS ICTKNLSQAE SQDPYDEHSG LSQSCDTVGT 900 EDLFVQQNVV PDRQVGKPDD EDMTLSCFLG NKQKKGSQAA KRRGARSSSK LKKGSALLRE 960 EHCASKPTII SNDIGPAMSK HVEEETVLHG GVAEPTDIIV EEKDDGLCSS LLQNRPKRQR 1020 KLPSRYSEFR VHHAELGPVY RFSAWHIISQ SSTVKLK

Sequence ? help Back to Top

Protein Sequence Length: 1057 aa Download sequence

MSGGPRPSPK GKSATKGGRK KSRTPSCRPS QSNYFRSYKN TRQLKPITFT SFKHTLSHPH  60
TLYVKTRRNP NNSNPMTPRV DDYEKDNLSA TDDDDDDDDG LKEDMAALAR ACLIGAPRAD  120
DSVPTEDPLL DAGDAVVPAA TDSDDDQDDF ECLKRVQSLY TPLSSLPPLP PEPAVSDDDD  180
VDDLETVRAI MRRLNTYGEG PHEGGMETLA DEGDQTSSPG CGGDIANGSI HYESDGGELC  240
PVSQDPNEAA TKELAENIEM QLSDFVESSE PDACESSKLP QKRMSFPPAV ETFVDAIKKN  300
RDLQRFLRSK LIALEAKIEE NKQIRNKIKI LKDFQASCTR RTGSALSLKK DPCVQLISAK  360
KSSAPKNTKK HKKVSAMCYG PEENSRVANY RMVLERYPLS LDRKKWSNVE RENLLKGIKQ  420
QFQEMVLQVS VDRISSEGSF GDANDMDNIL ASVRNLEIRP ERIREFLPKV NWDQLASMYV  480
AGRTGAECES RWLNCEDPLI NQGSWTNEED RSLLLIVQDM GIRNWFNIAA SLGTSRTPFQ  540
CLARFQRSLN PSMLNSEWTE EEDAQLCSAV ACFGDSNWQS VASVLERRTG TQCSNRWKKA  600
LCPERKGSFT RDEDIRLTVA VMLFGRKWNL IAKYVPGRIQ SQCRDRYLNS LDPSLKWGGW  660
TEEEDLRLEA AIAKHGYCWS KIAEEVPPRT DSQCRKRWKV LCPEQVPLLQ EAKKKQRSII  720
GSNFVDRESE RPTITLDDFL PLRALAPKSD VGASNLRKKD KSSIVPKKMS SKKRAKRTRL  780
RTKEVQDTEV NCDDEIKTCG EEVQVSACSN VGKRMRFKRR ANNTRSCPKE VVETTCSDMV  840
KTCIESSESQ DSDDMTLACF LRNISKKRLS ICTKNLSQAE SQDPYDEHSG LSQSCDTVGT  900
EDLFVQQNVV PDRQVGKPDD EDMTLSCFLG NKQKKGSQAA KRRGARSSSK LKKGSALLRE  960
EHCASKPTII SNDIGPAMSK HVEEETVLHG GVAEPTDIIV EEKDDGLCSS LLQNRPKRQR  1020
KLPSRYSEFR VHHAELGPVY RFSAWHIISQ SSTVKLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18100.2	1e-167	MYB family protein