PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX87074.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | bHLH | ||||||||
Protein Properties | Length: 242aa MW: 27647.7 Da PI: 5.2679 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44.9 | 2.1e-14 | 53 | 96 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 Er+RR+++N++++ Lr+++P+ + K++Ka+i + A+eYI++L+ RDX87074.1 53 VSERNRRKKLNERLFALRSVVPNiS------KMDKASIIKDAIEYIQHLH 96 57*********************66......*****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MENIDEEYKL YWETNMFLRT QELDSWGLDE ALSYYDSSSP DGAASSAASK NIVSERNRRK 60 KLNERLFALR SVVPNISKMD KASIIKDAIE YIQHLHEQEK IIQAEIMELE SGMPQKSPSY 120 DFEQEQLPVV LRSKKKRTEK LYDSVGSKNS PIEVLELRVT YMGEKTVVVS LTCSKRTDTM 180 VKLCEVFESL KLKIITANIT SFSGRLLKTV FVEANEEEKD HLQIKIQTAI AALNDPLSPM 240 SI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57150.1 | 9e-84 | bHLH family protein |