PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX86780.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 300aa MW: 34238 Da PI: 8.5984

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX86780.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.7	2.1e-13	98	149	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r +h +Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A+e++k+L+ RDX86780.1 98 QRITHITVERNRRKQMNEHLAVLRSLMPES---YVQRGDQASIVGGAIEFVKELE 149 799*************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MALETLPSNE FSNFIIYDTI SATPFSSHDS SEASFLESFV KYQEHDPAFD NCEMRTRKRQ 60 ASEPETIGRR QNVVGVQGRK KRRRKPRVCK NKEEAETQRI THITVERNRR KQMNEHLAVL 120 RSLMPESYVQ RGDQASIVGG AIEFVKELEH LLQSLEARKL QLLQQEVAQT NENTAISKLM 180 QPPFAQFFLY PQYTWSQTPN KYTSKTKAAI ADIEVTLIET HANLRILTRR SPRQLTKLIA 240 GFQTLYLTVL HLNVTTIDPL AFYSISAKVE EGFQLGSVDG IATAVHHLLA RIEEEASLCC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	79	85	RKKRRRK
2	79	86	RKKRRRKP
3	80	85	KKRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	3e-72	bHLH family protein