PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX86753.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 455aa MW: 50518.5 Da PI: 9.5442

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX86753.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.3e-05	144	166	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H RDX86753.1 144 FVCEICNKGFQRDQNLQLHRRGH 166 89*******************88 PP
2	zf-C2H2	12.1	0.00061	220	242	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +++ RDX86753.1 220 WKCDKCSKRYAVQSDWKAHFKVC 242 58*****************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MKSKKRGKDR KCTSEEASLA CVLVSCTCEL QRHPLVSSST FFHPLPSLSL SSHTLTHHTK 60 LKLPQVASLV VEEKMSNLTS ASSEISASSG IRNENGSLYA QFSSTSINQE PPQPKKKRSL 120 PGHPEPGAEV IALTPQTLLA TNRFVCEICN KGFQRDQNLQ LHRRGHNLPW KLKKKNSKEA 180 RKKVYVCPEE TCVHHDPSRA LGDLTGIKKH FFRKHGEKKW KCDKCSKRYA VQSDWKAHFK 240 VCGTREYKCD CGTLFSRRDS FITHRAFCDA LAQESIRTVN PHPHPHPHHP LLSSTYSQFP 300 RHALQAPSLL KREQEFNFLS QEIPSWLASP PAEETIRSLD FSTPHANNQS FVQHENPNPT 360 LVPSLSSFPY STSPSPHMSA TALLQKASQI GATVSSSAAS EAMLRPHLLV QQVHVPECSS 420 TIGYYMAPSS AVSGTVMPSR EEIVGTCGFA RGLAS

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MKSKKRGKDR KCTSEEASLA CVLVSCTCEL QRHPLVSSST FFHPLPSLSL SSHTLTHHTK  60
LKLPQVASLV VEEKMSNLTS ASSEISASSG IRNENGSLYA QFSSTSINQE PPQPKKKRSL  120
PGHPEPGAEV IALTPQTLLA TNRFVCEICN KGFQRDQNLQ LHRRGHNLPW KLKKKNSKEA  180
RKKVYVCPEE TCVHHDPSRA LGDLTGIKKH FFRKHGEKKW KCDKCSKRYA VQSDWKAHFK  240
VCGTREYKCD CGTLFSRRDS FITHRAFCDA LAQESIRTVN PHPHPHPHHP LLSSTYSQFP  300
RHALQAPSLL KREQEFNFLS QEIPSWLASP PAEETIRSLD FSTPHANNQS FVQHENPNPT  360
LVPSLSSFPY STSPSPHMSA TALLQKASQI GATVSSSAAS EAMLRPHLLV QQVHVPECSS  420
TIGYYMAPSS AVSGTVMPSR EEIVGTCGFA RGLAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	171	183	KLKKKNSKEARKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-108	C2H2 family protein