PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX86710.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MYB | ||||||||
Protein Properties | Length: 289aa MW: 32759.1 Da PI: 7.4183 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.4 | 5e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT++Ed+ l ++++++G g+W+ +++ g++R++k+c++rw++yl RDX86710.1 14 RGAWTAQEDKTLTKYITLHGVGRWRNLPQKAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.3 | 1.3e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + +E+el+v+++k+lG++ W++Ia +++ gRt++++k++w++ RDX86710.1 67 RGNISSDEEELIVRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111 78999*****************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence |
MGRSPCCSKE GLNRGAWTAQ EDKTLTKYIT LHGVGRWRNL PQKAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SSDEEELIVR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLGKRVKDGD 120 QTITTCSRRL SSQLPNENEN KTQNPMPHLG TPKLNSHVIR TKATKCSKVL ILNPLPQPSM 180 QLPNKSNGEV EVEEEGTLVD ALNNKMERGA YDNDILPFCG EEKEVSNDLL VDFNVGDICL 240 SDLLNSDLSN TYNLSCTEPI MLSDEHLNEW TQIDFADAFN NIHSFHFVP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 3e-63 | MYB family protein |