PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX86668.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB_related

Protein Properties

Length: 561aa MW: 61045.5 Da PI: 7.594

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX86668.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.7	3.1e-09	203	248	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrw 44 r+ W++eEd ll av+++G g+W+t a+ + +R++ q+ rw RDX86668.1 203 RKIWSEEEDMLLRAAVQRWGEGNWATMAKGDNfpIKRSATQLAQRW 248 567*************************988788669999999999 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
TPMPEKKNKK VPFTEEDAAT LMQRYDATTV FTLLQEVSNY PLPKIDWSEL VKKSATGISN 60 VREYQLLWRH LAYRHPLPQN FEDGAEPMDD DSDLECELEA LPPVSVESAS EAAACVKVMI 120 ASHTLSESAP SSSTIEAPLT INVPVCHSSR TPIESSQPFN SRQGTSIIFP VTVQRQTLPT 180 ASSTDAIETK GLVGGSMASK RKRKIWSEEE DMLLRAAVQR WGEGNWATMA KGDNFPIKRS 240 ATQLAQRWSI LRKKDGSANM GTVSTSTQYT TAEQLATRHS LSLALDMPFK KLTAPGMTDP 300 VKTSTSVKNQ VQIRNTTETV ASSFVSHQQP SQQALFGSSD SHAKSKLADE KPVLKGTIIS 360 DSLVKSTTAA PGTIDSSSNT TSQIKVAQVK SAVDIKPAVS SLTKPSISTN LPSDPMNKHV 420 TALPDKVPLK QEVNPSSIQK GKVQENEPPK VTTGSQVDSN LEKERLDKGQ EKSTPLVKIS 480 GGEEFSKNKA NPAVCEELGS VKKATDNSNL DKESQNLDQD KKINSFDKSS NSQNVNDKHV 540 NLPVQDERSQ SAKVVKTEGE C

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

TPMPEKKNKK VPFTEEDAAT LMQRYDATTV FTLLQEVSNY PLPKIDWSEL VKKSATGISN  60
VREYQLLWRH LAYRHPLPQN FEDGAEPMDD DSDLECELEA LPPVSVESAS EAAACVKVMI  120
ASHTLSESAP SSSTIEAPLT INVPVCHSSR TPIESSQPFN SRQGTSIIFP VTVQRQTLPT  180
ASSTDAIETK GLVGGSMASK RKRKIWSEEE DMLLRAAVQR WGEGNWATMA KGDNFPIKRS  240
ATQLAQRWSI LRKKDGSANM GTVSTSTQYT TAEQLATRHS LSLALDMPFK KLTAPGMTDP  300
VKTSTSVKNQ VQIRNTTETV ASSFVSHQQP SQQALFGSSD SHAKSKLADE KPVLKGTIIS  360
DSLVKSTTAA PGTIDSSSNT TSQIKVAQVK SAVDIKPAVS SLTKPSISTN LPSDPMNKHV  420
TALPDKVPLK QEVNPSSIQK GKVQENEPPK VTTGSQVDSN LEKERLDKGQ EKSTPLVKIS  480
GGEEFSKNKA NPAVCEELGS VKKATDNSNL DKESQNLDQD KKINSFDKSS NSQNVNDKHV  540
NLPVQDERSQ SAKVVKTEGE C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	2e-75	MYB_related family protein