PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX86578.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 261aa MW: 29027.8 Da PI: 7.4984 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.1 | 1.8e-17 | 26 | 76 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s++ GVr++ +g+W+AeI+d s k+ r +lg++ t+eeAa+a+++a+ l+g RDX86578.1 26 SKFVGVRQRA-SGKWAAEIKDTS---KKIRLWLGTYQTPEEAARAYDEAACLLRG 76 79*****999.7*********42...36**********************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MGLEHQHQKG MEGRFCEKVK MKKNKSKFVG VRQRASGKWA AEIKDTSKKI RLWLGTYQTP 60 EEAARAYDEA ACLLRGSNTR TNFSTHGYAI ATNSPISLKL RNLLHRKATS NQIQIQGTST 120 APSPNATSID SIMVMEDKLD NSVCSSEGKS LFVVQNQVSD NLYGLDINMI NCSMGITPNI 180 SQFDYSWPLA QQRINELPIP KDGLSVERQL SDLVYATDEC HVEDTYEYDG SVKMLRVHAD 240 GSLNSILGTC YLEHPAGPFS S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 2e-37 | ERF family protein |