PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX86331.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 353aa MW: 40212.2 Da PI: 9.1641

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX86331.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.9	4.9e-08	75	118	3	44
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 +WT+ E +l+ +a + + ++ +W+++a++++ g+t +++ + RDX86331.1 75 KWTPAENKLFENALAVYDKDtpdRWHKVAEMIP-GKTVMDVVKQY 118 8******************************.*99888777 PP
2	Myb_DNA-binding	44.4	3.9e-14	180	224	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE++l++ + k++G+g+W+ I+r + +Rt+ q+ s+ qky RDX86331.1 180 PWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKY 224 8***************************99**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MKCLDQDETW RISSLVSERE VHWVCLDLTS GSRIPEEHAS FPTHKKRWEM EILPPESPYV 60 YNSNWLVDDN RNSTKWTPAE NKLFENALAV YDKDTPDRWH KVAEMIPGKT VMDVVKQYKE 120 LEADVCNIEA GLIPIPGYST TSPFTLDWVN TPPYDGFKGL TAKRSSSARP PDQERKKGVP 180 WTEEEHKLFL LGLKKYGKGD WRNISRNFVI TRTPTQVASH AQKYFIRQLS GGKDKRRASI 240 HDITTVNLTE TTRTSSSQDK RSTSPPAMLS HQQPNSSTAT SSRVNFQWGN QPNAGMAMPL 300 NPAHEQVFMS PYGLNSYGFK VQGQNLHRSP SYLGPQAQNM VFQMQPSQHY SHA

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MKCLDQDETW RISSLVSERE VHWVCLDLTS GSRIPEEHAS FPTHKKRWEM EILPPESPYV  60
YNSNWLVDDN RNSTKWTPAE NKLFENALAV YDKDTPDRWH KVAEMIPGKT VMDVVKQYKE  120
LEADVCNIEA GLIPIPGYST TSPFTLDWVN TPPYDGFKGL TAKRSSSARP PDQERKKGVP  180
WTEEEHKLFL LGLKKYGKGD WRNISRNFVI TRTPTQVASH AQKYFIRQLS GGKDKRRASI  240
HDITTVNLTE TTRTSSSQDK RSTSPPAMLS HQQPNSSTAT SSRVNFQWGN QPNAGMAMPL  300
NPAHEQVFMS PYGLNSYGFK VQGQNLHRSP SYLGPQAQNM VFQMQPSQHY SHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58900.1	4e-91	MYB_related family protein