PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX86196.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 199aa MW: 22796.9 Da PI: 8.1219 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.6 | 7.5e-19 | 76 | 126 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeI+dp++ng r++lg++ t+eeA a+++a+ +++g RDX86196.1 76 HYRGVRRRP-WGKFAAEIWDPKKNG--GRVWLGTYETEEEAGLAYDRAAFEMRG 126 8********.***********9987..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MENNTYCDLS PLESVEAYLL ELEHDSNSNT LENVCHHLPS PTFGLEHVHN ANDLFACKSE 60 QVVEAHEVHA PPVWKHYRGV RRRPWGKFAA EIWDPKKNGG RVWLGTYETE EEAGLAYDRA 120 AFEMRGSKAK LNFPHLIGIP ASLEPVKVTK TSKLKSSFLS ASETQELQKK KKKMKIDLLN 180 RLARSRSQVE GLKWDHYMQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 3e-36 | ERF family protein |