PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX86090.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MIKC_MADS

Protein Properties

Length: 310aa MW: 34896.1 Da PI: 9.9971

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX86090.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	82.7	2.4e-26	91	140	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +ienk+ rqvtfskRr+g+ KKA+E+SvLCda+va+i+f +gkl+eyss RDX86090.1 91 QIENKISRQVTFSKRRTGLRKKAHEISVLCDAQVALIVFNAKGKLFEYSS 140 69**********************************************96 PP
2	K-box	62.4	1.8e-21	164	240	11	87
K-box 11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekel 87 ++ + +++ + kL ++e L++++R++ Ge+L++Lsl+eLq+Le+qL+ ++k+iR+kK + l eq + l kk ke RDX86090.1 164 DESQGNWSLQCFKLAGKVEVLEKNLRNFGGEGLDPLSLRELQSLEHQLDAAIKRIRTKKAKELQEQNSMLTKKIKEK 240 456789999*************************************************************9998875 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MEAMRIELRS KERVASREHT KPCFSSACVE PGPTTSYGTV LSPSETSTTC LSPTIPHRQR 60 IVPASSHPIK NRHRTVPNPN LMGRGRVQLR QIENKISRQV TFSKRRTGLR KKAHEISVLC 120 DAQVALIVFN AKGKLFEYSS ESSMENVLER YERHAHIGQL VDGDESQGNW SLQCFKLAGK 180 VEVLEKNLRN FGGEGLDPLS LRELQSLEHQ LDAAIKRIRT KKAKELQEQN SMLTKKIKEK 240 GKAVAERPHC VPETLGLACP PQLQPQQRLV PTLNLGETLQ EAPLEEVIEA RTAPSTTTLI 300 PPWMLHHFTR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60910.1	2e-61	MIKC_MADS family protein