PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX85672.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 239aa MW: 27099.7 Da PI: 6.3899

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX85672.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.3	0.00026	77	99	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k F ++ L H++ H RDX85672.1 77 FECQYCFKEFANSQALGGHQNAH 99 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MEKDICDLSP TWDGDNGTST EKRLRLFGFE LNPSKEGCAK ESGEGDESVN SSNSVSSGGD 60 KTVQEKTSAK DPDERKFECQ YCFKEFANSQ ALGGHQNAHK KERMKKKRLQ LQSINRYLQH 120 PFQTNYGFAY HASDTPWFYD PSTYNSEFTL CEEPQISFNS SVIDTNFSCD QKSSWYSLAS 180 HPPSQQDTCM FTFSNTNNNT PFIFKPCHFP ASNQSHSKAL DLQLGLNLES NTRSSIRRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06650.1	4e-14	C2H2 family protein