PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX85362.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 270aa MW: 29790.4 Da PI: 8.6544

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX85362.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11	0.0014	101	123	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H RDX85362.1 101 YECKTCNRCFPSFQALGGHRASH 123 99**********99999998887 PP
2	zf-C2H2	13.9	0.00016	184	206	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H RDX85362.1 184 HECSICGAEFSSGQALGGHMRRH 206 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MQVQQELLVL SKDQMMIKGK RTKRQRTPSP LRLAMPNSTS CSTINSIDSV ATSSTVATNS 60 TIELREDEDM ANCLILLAQG RHHVAAQPPR HHDKSTNLYL YECKTCNRCF PSFQALGGHR 120 ASHKKPKQNG TFSEAVTTFA NVEDNNNDRY DPTTSTTLSL KTPNGANNLC STSTATATKA 180 NKVHECSICG AEFSSGQALG GHMRRHRTPV NASSMSGGNS NRELQEPKKP LKLDLNLPAP 240 EDDHRESKFS FQQRENVIVF SPSSLVDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	5e-43	C2H2 family protein