PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX84763.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family C3H
Protein Properties Length: 456aa    MW: 52052.8 Da    PI: 9.2041
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX84763.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.42.1e-07429449526
                 --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                 lCr+++r G C +Gd+CkF H+
  RDX84763.1 429 LCRHYSR-GRCYFGDNCKFLHD 449
                 9******.*************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 456 aa     Download sequence    
MATKDSPLEL HEITTDSEGS DWNDSEEDPD YDALEETHSN FSNLSLKHKA KARVVEDKGI  60
GEQVLEVTAS VQDGENFDKV QKLIEEGLVE KLKVNECKLY LRKNGLRLTG NKDTLIQRIK  120
EHLEILNGGE KKYPPSSFVL NCKGDACAGD VVLFEQNVYE MFNIASRSAS GPPCGKRIVA  180
GRIVKESYGA AKQQHTFTIE VLWSKGEKPL PPLYPLLIKG RNLYKLKTLR QKWEDEAKRQ  240
KILMEKHSRG TVARADREVR IQEKEKRKNI MKNRVSIKHS AKNQSQPHSH VTRPPYQPQE  300
INVAINPEKP VFSSRNSGLT ADIRKETSFI RNNPAAVTGQ FHNMHNQQAW NLTADCRSTF  360
DMRGAELGAY YNYADPHFRE KPTTIEKCHP LIAETTGFTG WTHHRMPLAN ANHSYPLIPN  420
TQSYKPNQLC RHYSRGRCYF GDNCKFLHDW RDKGNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51980.15e-06C3H family protein