PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX84328.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

AP2

Protein Properties

Length: 508aa MW: 55991 Da PI: 8.7714

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX84328.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.4	6.5e-17	142	191	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g RDX84328.1 142 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 191 78*****************......55**********************997 PP
2	AP2	43.8	6.4e-14	234	284	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g RDX84328.1 234 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 284 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 508 aa Download sequence
MWDLNDSPDQ RKDYESEGCS SSLNDDKGKR VGSLSNSSSS ALVVEDGSEE EDSDRGGTGT 60 TALDKKSSKI FGFEVTHDHP PVTRQFFPVD DSELPSAAAS SFPRAHWVGV KFCQSETLGA 120 GKAVKVSEPM KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR 180 AYDRAAIKFR GVEADINFNI EDYEEDLKQM SNLTKEEFVH VLRRQSTGFP RGSSKYRGVT 240 LHKCGRWEAR MGQFLGKKYV YLGLFDTEIE AARAYDKAAI KCNGKEAVTN FDPSIYDNEL 300 NSESSGAITA DHNLDLSLGS SSSKHSNSQS SGNHLPNTAS DQHMTPESNW RNGGIKPKAH 360 LVNILPKPCG RSNMEAYARD GHGESEALRL LSQTHLHSPA TKEMHRYGPY RSPAEPQMPH 420 NFAHLHPPNF HVPSSSNGGR IGSDLSLSMS DQQQWQAGPP HLLASAAASS GFPPQIRPSQ 480 VLLAKSSQTK AIMTRRTYHC SSKASKGH

Sequence ? help Back to Top

Protein Sequence Length: 508 aa Download sequence

MWDLNDSPDQ RKDYESEGCS SSLNDDKGKR VGSLSNSSSS ALVVEDGSEE EDSDRGGTGT  60
TALDKKSSKI FGFEVTHDHP PVTRQFFPVD DSELPSAAAS SFPRAHWVGV KFCQSETLGA  120
GKAVKVSEPM KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR  180
AYDRAAIKFR GVEADINFNI EDYEEDLKQM SNLTKEEFVH VLRRQSTGFP RGSSKYRGVT  240
LHKCGRWEAR MGQFLGKKYV YLGLFDTEIE AARAYDKAAI KCNGKEAVTN FDPSIYDNEL  300
NSESSGAITA DHNLDLSLGS SSSKHSNSQS SGNHLPNTAS DQHMTPESNW RNGGIKPKAH  360
LVNILPKPCG RSNMEAYARD GHGESEALRL LSQTHLHSPA TKEMHRYGPY RSPAEPQMPH  420
NFAHLHPPNF HVPSSSNGGR IGSDLSLSMS DQQQWQAGPP HLLASAAASS GFPPQIRPSQ  480
VLLAKSSQTK AIMTRRTYHC SSKASKGH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-125	AP2 family protein