PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX84123.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

M-type_MADS

Protein Properties

Length: 393aa MW: 44466.6 Da PI: 8.1912

Description

M-type_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX84123.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	46	6.8e-15	15	57	1	43
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43 k+ien++n +tf+kR+ i KKA+ELS+LC+a+v +++ s+ RDX84123.1 15 KKIENTRNLLITFTKRKYCIHKKANELSTLCGAKVDILMCTSS 57 68***********************************998776 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MEGRKIKRKQ KREIKKIENT RNLLITFTKR KYCIHKKANE LSTLCGAKVD ILMCTSSADW 60 FSYGEPSHRA MTRCSGERKT TKDGINQLVQ YHTKSKIDEL NEKNNALMNQ MSYEKEQENE 120 LVKILKIRNT CGWWDAKIQD LSYEQAKEME ASFVELKKKL ENELSIKHGE KENVILVSRV 180 NSCHTYTSGS NISEVVFGAK NEDCGIGASE SILPNISRSP SNEEQKFNFL PYGERREDLF 240 DIVYPLRIQA RGDSYFVDDP NASSGKSAFT SPTKQTQGLN LTNASGSSNH ILGFSSSSQS 300 QKYHPFLSIA NNQTIGRKGN YDFVFSPSNQ YQDTNQFLCD ASNKNAGGND SDVLFASSHL 360 NQQQGANPFI YIENKENGDF SFPPFNGYGH GYF

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MEGRKIKRKQ KREIKKIENT RNLLITFTKR KYCIHKKANE LSTLCGAKVD ILMCTSSADW  60
FSYGEPSHRA MTRCSGERKT TKDGINQLVQ YHTKSKIDEL NEKNNALMNQ MSYEKEQENE  120
LVKILKIRNT CGWWDAKIQD LSYEQAKEME ASFVELKKKL ENELSIKHGE KENVILVSRV  180
NSCHTYTSGS NISEVVFGAK NEDCGIGASE SILPNISRSP SNEEQKFNFL PYGERREDLF  240
DIVYPLRIQA RGDSYFVDDP NASSGKSAFT SPTKQTQGLN LTNASGSSNH ILGFSSSSQS  300
QKYHPFLSIA NNQTIGRKGN YDFVFSPSNQ YQDTNQFLCD ASNKNAGGND SDVLFASSHL  360
NQQQGANPFI YIENKENGDF SFPPFNGYGH GYF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	4	12	RKIKRKQKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60440.1	3e-15	M-type_MADS family protein