PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX84030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | NF-YA | ||||||||
Protein Properties | Length: 291aa MW: 32566.8 Da PI: 10.0614 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 105.2 | 5.6e-33 | 141 | 197 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 d p+YVNaKQy++Il+RRq+Rakle+++kl +ksrkpylheSRh+hAl+R RgsgGrF RDX84030.1 141 DGPIYVNAKQYHGILRRRQSRAKLEAQNKL-IKSRKPYLHESRHRHALKRVRGSGGRF 197 57****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 291 aa Download sequence |
MVKTQAQGPR VEEGCTWATQ KTTLIAKVQR GFLVRVYLCT VCASSSTKPK QRGEELERER 60 EKFYSSEPFF LSNHTDTMYN YSQVDCSRHS MAHTPYPCGD PYFGSSLVAY GPQAINQPQM 120 FPQMLGLAST RIALPVELAE DGPIYVNAKQ YHGILRRRQS RAKLEAQNKL IKSRKPYLHE 180 SRHRHALKRV RGSGGRFLSA KQLQQSNAEL VTDAHSGQNH PVNVHQMKDA LEVESHPSRT 240 GENASMKAIS GLTMSGNSVS FRQPEHNFLG NSPNIGGWPV RGGTNSLLVW Q |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 182 | 191 | RHRHALKRVR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72830.1 | 4e-40 | NF-YA family protein |