PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX83705.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 230aa MW: 25319.1 Da PI: 5.6351 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.8 | 5.5e-18 | 32 | 81 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ykGVr +k +g+Wv+eIr p++ r r++lg+++++e+Aa+a +aa +l+g RDX83705.1 32 LYKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDSPEKAARAFDAALYCLRG 81 59****999.**********933...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MEKHAMDVAG ASDSNTGETP SSCVNDNNKN KLYKGVRKRK WGKWVSEIRL PNSRERIWLG 60 SYDSPEKAAR AFDAALYCLR GRHANFNFPN TPCNMLINVP LPAHQSLTSQ EIQDLAAKFA 120 NQDPLLLKQQ PLQRSGSSSA LPNSSPLIGL KSDSTVESAT TTCNPTTTTS SSCSTMYECD 180 GTVQVDHGDM DWTFLNVFDY SNEVLPVASD YDLYAELDKM HSGPKAENSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 34 | 40 | KGVRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G74930.1 | 3e-41 | ERF family protein |