PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX83604.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 436aa MW: 48380.5 Da PI: 9.1918

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX83604.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.2e-05	72	94	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H RDX83604.1 72 FVCEICNKGFQRDQNLQLHRRGH 94 89*******************88 PP
2	zf-C2H2	11.8	0.00076	148	170	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ RDX83604.1 148 WKCDKCSKIYAVQSDWKAHSKTC 170 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MFPAVMSNSN SLSEEATVSC GTRISGVNHI VTTISPQQPQ KIKKKRSLPG NPDPDAEVIA 60 LSPKTLLATN RFVCEICNKG FQRDQNLQLH RRGHNLPWKL KQRNNKEMRK KAYVCPEPSC 120 VHHNPSRALG DLTGIKKHYC RKHGEKKWKC DKCSKIYAVQ SDWKAHSKTC GTREYRCDCG 180 TLFSRKDSFI THRAFCDALA EESARVSANQ LAATSTTNPL VQSLFLFPNQ QQHNNFINPW 240 DPNPNPSNLA TLHNNIKPES QNFHIPNNVN NLSSSPFLHH HPKTMITSPF RDLHAHAQPH 300 SNAATSAHLS ATALLQKAAT VGAAPLTGPT HVTQLSMAEL GTVTQLDSVP PERYMNMRGL 360 KNSDGLTRDF LGLANAGAVD VSIDVKDMLT FTGGSAEYNH HHQPYEHHHN NSLFKPQQGF 420 GFLGTTTGPE SWGNCE

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MFPAVMSNSN SLSEEATVSC GTRISGVNHI VTTISPQQPQ KIKKKRSLPG NPDPDAEVIA  60
LSPKTLLATN RFVCEICNKG FQRDQNLQLH RRGHNLPWKL KQRNNKEMRK KAYVCPEPSC  120
VHHNPSRALG DLTGIKKHYC RKHGEKKWKC DKCSKIYAVQ SDWKAHSKTC GTREYRCDCG  180
TLFSRKDSFI THRAFCDALA EESARVSANQ LAATSTTNPL VQSLFLFPNQ QQHNNFINPW  240
DPNPNPSNLA TLHNNIKPES QNFHIPNNVN NLSSSPFLHH HPKTMITSPF RDLHAHAQPH  300
SNAATSAHLS ATALLQKAAT VGAAPLTGPT HVTQLSMAEL GTVTQLDSVP PERYMNMRGL  360
KNSDGLTRDF LGLANAGAVD VSIDVKDMLT FTGGSAEYNH HHQPYEHHHN NSLFKPQQGF  420
GFLGTTTGPE SWGNCE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	99	111	KLKQRNNKEMRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02670.1	1e-112	C2H2 family protein