PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX83112.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

SBP

Protein Properties

Length: 711aa MW: 78924.1 Da PI: 8.2026

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX83112.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	117	9.6e-37	56	132	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv+gCe+d+se+k yhrrh+vC +++a++v+++g+ +r+CqqC++fh l +fDe+krsCrr+L++hn rrr+k RDX83112.1 56 RCQVPGCEVDISELKGYHRRHRVCLRCANAATVVLHGEAKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNTRRRRKP 132 6************************************************************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 711 aa Download sequence
IPPNDKVRKR DPRLTCSNFL AGRVPCACPE LDAKLEDRGL PGKKRARTAR ASASARCQVP 60 GCEVDISELK GYHRRHRVCL RCANAATVVL HGEAKRYCQQ CGKFHLLPDF DEGKRSCRRK 120 LERHNTRRRR KPPTDSGGAG HSEVEPVTQN EENSYDAEAG KDCSILSTEI NDKGVSLDRE 180 DEPVPIPSSA PDSQNINSDS GVSLAVSGET ARVNSGKDVS NTSNSPSYCD NKSAYSSMVG 240 FRLSFMTGIL RNFPEGYDTK QPNAFSDIPM VGKYAFRVGG IYPPWLLKDS LEYVRDIVAP 300 GKILSGRGTT LVHLNDMIFR VMKDGTSVTK VEANMQAPRL HYVHPTYFEA GKPMEFVACG 360 SNLLQPKFRL LVSFSGKYLK CEYCVPSPHN LTEDNISCAF DNQLYKIYVP RTEESLFGPA 420 FIEVENESGL SNFIPVLIGD KEICTEMKTL QQKLDVSLLS KQFRSASGGS VCSSCETFAL 480 SHASSSDLLL DIAWLLKDTT SENFDRVMTA SQIQRYCHLL DFLICNDSTI ILGKILPNLI 540 ILTESMKSDV VITRTSDVDM TRLLNHIHDA RNAIYQKHQK GGGIIVHSEM EGFKPAQDCT 600 QDNKLSVRVN SQGILSRADA KWGVLKSPIC NDKNERIPLL KRDIIMNMEE FPERYGRQCL 660 GRGFLTSRPA IFVMVSVAVC LGVCVAVLHP GRVSELAVSV RRRVSEFDKS G

Sequence ? help Back to Top

Protein Sequence Length: 711 aa Download sequence

IPPNDKVRKR DPRLTCSNFL AGRVPCACPE LDAKLEDRGL PGKKRARTAR ASASARCQVP  60
GCEVDISELK GYHRRHRVCL RCANAATVVL HGEAKRYCQQ CGKFHLLPDF DEGKRSCRRK  120
LERHNTRRRR KPPTDSGGAG HSEVEPVTQN EENSYDAEAG KDCSILSTEI NDKGVSLDRE  180
DEPVPIPSSA PDSQNINSDS GVSLAVSGET ARVNSGKDVS NTSNSPSYCD NKSAYSSMVG  240
FRLSFMTGIL RNFPEGYDTK QPNAFSDIPM VGKYAFRVGG IYPPWLLKDS LEYVRDIVAP  300
GKILSGRGTT LVHLNDMIFR VMKDGTSVTK VEANMQAPRL HYVHPTYFEA GKPMEFVACG  360
SNLLQPKFRL LVSFSGKYLK CEYCVPSPHN LTEDNISCAF DNQLYKIYVP RTEESLFGPA  420
FIEVENESGL SNFIPVLIGD KEICTEMKTL QQKLDVSLLS KQFRSASGGS VCSSCETFAL  480
SHASSSDLLL DIAWLLKDTT SENFDRVMTA SQIQRYCHLL DFLICNDSTI ILGKILPNLI  540
ILTESMKSDV VITRTSDVDM TRLLNHIHDA RNAIYQKHQK GGGIIVHSEM EGFKPAQDCT  600
QDNKLSVRVN SQGILSRADA KWGVLKSPIC NDKNERIPLL KRDIIMNMEE FPERYGRQCL  660
GRGFLTSRPA IFVMVSVAVC LGVCVAVLHP GRVSELAVSV RRRVSEFDKS G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	118	130	RRKLERHNTRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18830.2	1e-162	SBP family protein