PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX83046.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MYB | ||||||||
Protein Properties | Length: 298aa MW: 33774.9 Da PI: 5.4537 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.7 | 1.1e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT++Ed+ l d+v+++G g+W++ +++ g++R++k+c++rw++yl RDX83046.1 14 RGAWTAQEDKVLTDYVTLHGEGRWRSLPQKAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.2 | 1.4e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + +E+el+v+++k+lG++ W++Ia +++ gRt++++k++w++ RDX83046.1 67 RGNISSDEEELIVRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111 78999*****************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence |
MGRSPCCSKE GLNRGAWTAQ EDKVLTDYVT LHGEGRWRSL PQKAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SSDEEELIVR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLGKRVKDGD 120 QTITTCSRRL SSQLPNENKT QNPMPHLGTP KLDSHVVRTK ATKCSKVLIL NPLPQPSMQL 180 PNKSNGEVEE EEEATLVDDL NNQMKHGAYD NDILPFCGEE KEVSNDLLVD FNVGDICLSD 240 LLNSDLSDPC NLNCNEPIMF SDELLKEWTQ SDFEDSSNNL YSFISFLESD HENHNGSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 1e-65 | MYB family protein |