PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX83045.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

Trihelix

Protein Properties

Length: 587aa MW: 67204.1 Da PI: 6.595

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX83045.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	94.6	9.4e-30	131	216	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r++++++++++++k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea RDX83045.1 131 RWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRIMsEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 216 8***********************************999*************************98..55667*****85 PP
2	trihelix	49.1	1.5e-15	430	513	2	84
trihelix 2 WtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 W+++e+ L ++r e+e+r+ + g++++ Wee++ km+ g+ers+ kekwe+++++ ++ k+ +k+++e+s+ c yfd+ RDX83045.1 430 WPESEITRLQQLRAEIETRYMQsGCSEEIMWEEIATKMACFGYERSALVFKEKWESISNYARNAKDVGNKKRKENSRGCFYFDN 513 *****************98648*******************************************9********86 PP

Sequence ? help Back to Top
Protein Sequence Length: 587 aa Download sequence
MEMEDHHPRQ HHHHHHEQQQ QYSITDLRQL VNNGPRSSHF PSMPPQPTAE LFPAGHPNLQ 60 AATQHYEMMM FGRQVADIMP RCLHDFASND SATNTSIVVA TPTTTSASTP PLSCLEAETA 120 GCIGGDASTG RWPRQETLTL LEIRSRLDSK FKEANQKGPL WDEVSRIMSE EHGYQRSGKK 180 CREKFENLYK YYKKTKEGKA GRQDGKHYRF FRQLEALYGE NSNQASVPET NFGSSSLRFH 240 TSSHNPCQTN QEMFQSQKHC DSLSLTNSTD LDTSSSDDND QNSTGGLKDN DSTEKRRKRV 300 SGRSWKVKIK DFIDSQMRKL VEKQEEWLDK LTKTLEQKEK ERVLREEEWR RQEATRLERE 360 HKFWAKERAW IEARDAALME ALQKLTGNEI KSTQSPEGLM VTGIQNHSEN QNEDGSEILN 420 STTARGAESW PESEITRLQQ LRAEIETRYM QSGCSEEIMW EEIATKMACF GYERSALVFK 480 EKWESISNYA RNAKDVGNKK RKENSRGCFY FDNSDQSSLY NQGGAYCDIN DQRHETGRLQ 540 TNDGSSPSNS NVGNAVAGDN CFPFLMTEGG NLWESYSLKV NKANQNQ

Sequence ? help Back to Top

Protein Sequence Length: 587 aa Download sequence

MEMEDHHPRQ HHHHHHEQQQ QYSITDLRQL VNNGPRSSHF PSMPPQPTAE LFPAGHPNLQ  60
AATQHYEMMM FGRQVADIMP RCLHDFASND SATNTSIVVA TPTTTSASTP PLSCLEAETA  120
GCIGGDASTG RWPRQETLTL LEIRSRLDSK FKEANQKGPL WDEVSRIMSE EHGYQRSGKK  180
CREKFENLYK YYKKTKEGKA GRQDGKHYRF FRQLEALYGE NSNQASVPET NFGSSSLRFH  240
TSSHNPCQTN QEMFQSQKHC DSLSLTNSTD LDTSSSDDND QNSTGGLKDN DSTEKRRKRV  300
SGRSWKVKIK DFIDSQMRKL VEKQEEWLDK LTKTLEQKEK ERVLREEEWR RQEATRLERE  360
HKFWAKERAW IEARDAALME ALQKLTGNEI KSTQSPEGLM VTGIQNHSEN QNEDGSEILN  420
STTARGAESW PESEITRLQQ LRAEIETRYM QSGCSEEIMW EEIATKMACF GYERSALVFK  480
EKWESISNYA RNAKDVGNKK RKENSRGCFY FDNSDQSSLY NQGGAYCDIN DQRHETGRLQ  540
TNDGSSPSNS NVGNAVAGDN CFPFLMTEGG NLWESYSLKV NKANQNQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	295	323	KRRKRVSGRSWKVKIKDFIDSQMRKLVEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	1e-133	Trihelix family protein