PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX82527.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MYB | ||||||||
Protein Properties | Length: 368aa MW: 41957.6 Da PI: 6.6065 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.6 | 3.2e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd++lvd+++++G g+W+t ++ g+ R++k+c++rw +yl RDX82527.1 14 KGPWTTEEDQKLVDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.4 | 2.8e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ RDX82527.1 67 RGRFSFEEEETIIQLHSILGNK-WSAIASRLP-GRTDNEIKNYWNTH 111 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 368 aa Download sequence |
MGRAPCCDKN GLKKGPWTTE EDQKLVDYIQ KHGYGNWRTL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIASRLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHSPRL DLLDISSILN ASFYGSSQIN IQRLLGMQHS LVNPELLSLA SSLFSSSSSS 180 SHQHKDLDHD MCAQKGQQNQ LCDPQIQNHV PHFVQFQDPV QDVPACSTMF STPCVSLVEP 240 NNVDPYPSSS FTDFSYQQHS HDDQLISDWH KNGIALTDDY IPHDQLPNYN YYTSDSQNLM 300 YPPLSEPSTF HSNNSNQNFN FASVLSTPSS SPTPLNSNST IINGSNTEDE RDQTYDSRHM 360 LKFESQIF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21440.1 | 1e-104 | MYB family protein |