PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX82223.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HD-ZIP

Protein Properties

Length: 348aa MW: 38946.1 Da PI: 6.4053

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX82223.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54	2.8e-17	200	254	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k RDX82223.1 200 RKKLRLNKEQSAFLEESFKEHNTLNPKQKLALAKQLHLRPRQVEVWFQNRRARTK 254 678899***********************************************98 PP
2	HD-ZIP_I/II	125.6	2.3e-40	200	290	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rl+keq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++d+l+een+rL+ke +eLr +lk RDX82223.1 200 RKKLRLNKEQSAFLEESFKEHNTLNPKQKLALAKQLHLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCDTLREENRRLQKELQELR-ALK 290 69*************************************************************************************9.665 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MELGLSLGNA SRSLGFMEKP LEGSNQLGLG FNTTLSIGPL ITKQIDQHQQ QEQIANTTEE 60 NHEETISELS LISTCPKHTN NTLVQLDLLP HTPAVPPINP PSNFLAWDPL PENGTAGRSS 120 MELDVNTIVA TAGMITAKTE KEMVISPSSN NAAAWFQMDL CIFSTERSVS GEDYDERLRD 180 CSRGSDEDEN GGSGSGGTTR KKLRLNKEQS AFLEESFKEH NTLNPKQKLA LAKQLHLRPR 240 QVEVWFQNRR ARTKLKQTEV DCEYLKRCCD TLREENRRLQ KELQELRALK NLSPFCMQLP 300 ATTLTMCPSC ERVATNSITT TIKTIHQEPI ASKAIEFPIG KPKFYDKS

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MELGLSLGNA SRSLGFMEKP LEGSNQLGLG FNTTLSIGPL ITKQIDQHQQ QEQIANTTEE  60
NHEETISELS LISTCPKHTN NTLVQLDLLP HTPAVPPINP PSNFLAWDPL PENGTAGRSS  120
MELDVNTIVA TAGMITAKTE KEMVISPSSN NAAAWFQMDL CIFSTERSVS GEDYDERLRD  180
CSRGSDEDEN GGSGSGGTTR KKLRLNKEQS AFLEESFKEH NTLNPKQKLA LAKQLHLRPR  240
QVEVWFQNRR ARTKLKQTEV DCEYLKRCCD TLREENRRLQ KELQELRALK NLSPFCMQLP  300
ATTLTMCPSC ERVATNSITT TIKTIHQEPI ASKAIEFPIG KPKFYDKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	199	205	TRKKLRL
2	249	257	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	7e-64	HD-ZIP family protein