PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX82051.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 453aa MW: 50120.1 Da PI: 6.5083

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX82051.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.1	3.1e-16	137	182	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ RDX82051.1 137 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 182 899***************************.*********996 PP
2	Myb_DNA-binding	55.4	1.4e-17	189	232	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l +a++ +G++ W+ Iar ++ gRt++ +k++w+ RDX82051.1 189 RRAFSEEEEERLMQAHRIYGNK-WAMIARLFP-GRTDNAVKNHWHV 232 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MKAWPASVAY SSQENTNSLS RYPSSSSYSS SSPPMGMVYA DMDSLSLCSN YGVVLSHQDC 60 YVSNGGTNWG LPFMRECLGG NNFEEHPNSD DVVEEGKGSD SSGEDSDKVN NNANSFNEEN 120 PNENSGSGSG HSKLCARGHW RPAEDSKLKE LVALYGPQNW NLIAEKLEGR SGKSCRLRWF 180 NQLDPRINRR AFSEEEEERL MQAHRIYGNK WAMIARLFPG RTDNAVKNHW HVIMARKYRE 240 QSSAYRRRRL SQSIYRRVEE NTASSIVSRD TTTTGTEAPP PYCLNLPNGG LANSNMASFP 300 YATAPFHGVV APNGGVEYGL NASPHMTGAK EASSTTKLAP PHIALYPQQS QLDFFSGARS 360 NDYFGQNRCW ERPSDASAHH NSSSFYPHYP QYVMLMQHQN NHNFYGLSNS TAQILGSEAS 420 LSSVAEHRDE AVSSDLPDAI PPPFIDFLGV GAT

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MKAWPASVAY SSQENTNSLS RYPSSSSYSS SSPPMGMVYA DMDSLSLCSN YGVVLSHQDC  60
YVSNGGTNWG LPFMRECLGG NNFEEHPNSD DVVEEGKGSD SSGEDSDKVN NNANSFNEEN  120
PNENSGSGSG HSKLCARGHW RPAEDSKLKE LVALYGPQNW NLIAEKLEGR SGKSCRLRWF  180
NQLDPRINRR AFSEEEEERL MQAHRIYGNK WAMIARLFPG RTDNAVKNHW HVIMARKYRE  240
QSSAYRRRRL SQSIYRRVEE NTASSIVSRD TTTTGTEAPP PYCLNLPNGG LANSNMASFP  300
YATAPFHGVV APNGGVEYGL NASPHMTGAK EASSTTKLAP PHIALYPQQS QLDFFSGARS  360
NDYFGQNRCW ERPSDASAHH NSSSFYPHYP QYVMLMQHQN NHNFYGLSNS TAQILGSEAS  420
LSSVAEHRDE AVSSDLPDAI PPPFIDFLGV GAT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	245	250	YRRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	6e-72	MYB family protein