PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX81752.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 273aa MW: 31026.8 Da PI: 9.3748 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.7 | 3.3e-19 | 50 | 100 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrd ng +r +lg+f taeeAa+a+++a+ +++g RDX81752.1 50 KYRGVRRRP-WGKFAAEIRDSMRNG--QRLWLGTFSTAEEAARAYDRAAYAMRG 100 8********.**********43354..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 273 aa Download sequence |
MRHLTYDYKF SICICTLQSE SLSHMHQKEK HTMDEEGSRG KTKDEEEQVK YRGVRRRPWG 60 KFAAEIRDSM RNGQRLWLGT FSTAEEAARA YDRAAYAMRG PFAVLNFPDE YPPSAGAAPS 120 SSASASSASA PSSSHGHVEV RGRGEQADQV FEFEYFDDKL LEDLLGYDEK NKHDKVHNVS 180 GGDVSDHVVR EAHVLFRVPE CMSVTRKHLT RMVVRTSRLK HVSSCHNLNC DVGRSRPKPS 240 RPGRSRHRRF CLGNARKPFG KAGLESDMWV REL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 6e-28 | ERF family protein |