PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX81698.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 462aa MW: 50364.4 Da PI: 8.5544

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX81698.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.3	1.3e-05	84	106	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H RDX81698.1 84 FVCEICNKGFQRDQNLQLHRRGH 106 89*******************88 PP
2	zf-C2H2	12.3	0.00053	160	182	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ RDX81698.1 160 WKCDKCSKKYAVQSDWKAHSKTC 182 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MRKDDEEFDV TKTMSNLTSP SGEASASSGN RTEIGTDYSQ QYFAPPPTQT QPPLKKKRNL 60 PGNPDPEAEV VALSPKTLLA TNRFVCEICN KGFQRDQNLQ LHRRGHNLPW KLKQRTSQEI 120 RKKVYVCPEA TCVHHDPSRA LGDLTGIKKH FCRKHGEKKW KCDKCSKKYA VQSDWKAHSK 180 TCGTREYRCD CGTLFSRRDS FITHRAFCDA LAEESGRSVT GIGIGIGNSA PHQVGAVGVV 240 IPSASESHQE DIHGSFSLKK EQQSFMPPWL EAVPTVDLSP SSSSIFFSPE SLQENPNPRG 300 GPTLLPPYQT APSSPHMSAT ALLQKAAQMG ASMSKTGSMI RTHQQTHVSA DSGNLSSRED 360 QMIPTSNATP HGSVPFGNKA VGVSPSLLHH VINSFSSPFE GTSFEGMTKT TTADGAGGNS 420 EALTRDFLGL RPLSHTDILN IAGMGHCMNS SQHNQTQNPW QG

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MRKDDEEFDV TKTMSNLTSP SGEASASSGN RTEIGTDYSQ QYFAPPPTQT QPPLKKKRNL  60
PGNPDPEAEV VALSPKTLLA TNRFVCEICN KGFQRDQNLQ LHRRGHNLPW KLKQRTSQEI  120
RKKVYVCPEA TCVHHDPSRA LGDLTGIKKH FCRKHGEKKW KCDKCSKKYA VQSDWKAHSK  180
TCGTREYRCD CGTLFSRRDS FITHRAFCDA LAEESGRSVT GIGIGIGNSA PHQVGAVGVV  240
IPSASESHQE DIHGSFSLKK EQQSFMPPWL EAVPTVDLSP SSSSIFFSPE SLQENPNPRG  300
GPTLLPPYQT APSSPHMSAT ALLQKAAQMG ASMSKTGSMI RTHQQTHVSA DSGNLSSRED  360
QMIPTSNATP HGSVPFGNKA VGVSPSLLHH VINSFSSPFE GTSFEGMTKT TTADGAGGNS  420
EALTRDFLGL RPLSHTDILN IAGMGHCMNS SQHNQTQNPW QG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	111	123	KLKQRTSQEIRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55110.1	1e-121	C2H2 family protein