PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RDX81609.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 287aa MW: 32501.8 Da PI: 7.0212 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.1 | 1.4e-20 | 101 | 151 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr+++ +g+W+AeIrdp+ + +r++lg+f tae+Aa a+++a++k++g RDX81609.1 101 PHYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFETAEDAALAYDKAALKFKG 151 68********.**********94....45************************987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 287 aa Download sequence |
MRRLYYVLVQ SSKVKVDPRR HGKLPLSSQA SEEKEKEDAV KEFDAYASWS SETDMSAMVS 60 ALAQVMGTTN RNPHMLQSTS LHEPHPYPSQ PPLDQEVRKK PHYRGVRQRP WGKWAAEIRD 120 PKKAARVWLG TFETAEDAAL AYDKAALKFK GTKAKLNFPE KVHQDVGYLQ QQDSSNRNVF 180 PFHATSTTAT GATGSVSSLD VLAPPSLSTH DQQHDHQVFP NLFQYAQILS SDDAEFPYYT 240 SHLFNQQQQQ PFNSEFSTTL SSSSSPSSYF YNQQQQYDEQ GHDHSGQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G07310.1 | 1e-38 | ERF family protein |