PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX81220.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

M-type_MADS

Protein Properties

Length: 477aa MW: 54273.1 Da PI: 5.8032

Description

M-type_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX81220.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	41.1	2.2e-13	9	52	1	44
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44 k+i+n + r f kR++ ++KK +E S+ C+++ ++ii+ +g RDX81220.1 9 KPISNRRERDLAFMKRKKALMKKMSEFSTVCGVKTCLIIYDGNG 52 68*************************************97766 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MGRPKLILKP ISNRRERDLA FMKRKKALMK KMSEFSTVCG VKTCLIIYDG NGDALPLTWP 60 QDPNEVHSII KRYEGVKNEK LPKNFDLNNF FEIKKNMVEG EISKVQKETL KIKYPTWHPS 120 FNNLGIEELR NFMARLDIKL ETCNHQRMEV LRKHQIEAAN FNLMQCMVQS ESAAPNPTQL 180 NFMQNISQNQ LILAPPMKPL NDGNLVASYL LNLDRSSSSQ SQILDRGSSS QSHILDKGSS 240 SQSQILDRCS SSQSQILDRG SSSQYQMLNF DPNLMQLREK NKGVVHITNH VDVPLDCTNQ 300 IHAFENSTNQ LDVPLDCANQ IGTFGNSTDK LDMPVDLTTA LDECLDYFSQ LCEIEDLAGQ 360 FDEVVNWTRQ PDESINWPNQ HGVPLIEGST KAMNGATNYD TNFHGYEQNP ESSLCYYNGG 420 MQSMQPYNYN ATFQNIASQS ENVQQRVSLP TLPPPVDEFQ TNHYNNMLQN PSYNRII

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MGRPKLILKP ISNRRERDLA FMKRKKALMK KMSEFSTVCG VKTCLIIYDG NGDALPLTWP  60
QDPNEVHSII KRYEGVKNEK LPKNFDLNNF FEIKKNMVEG EISKVQKETL KIKYPTWHPS  120
FNNLGIEELR NFMARLDIKL ETCNHQRMEV LRKHQIEAAN FNLMQCMVQS ESAAPNPTQL  180
NFMQNISQNQ LILAPPMKPL NDGNLVASYL LNLDRSSSSQ SQILDRGSSS QSHILDKGSS  240
SQSQILDRCS SSQSQILDRG SSSQYQMLNF DPNLMQLREK NKGVVHITNH VDVPLDCTNQ  300
IHAFENSTNQ LDVPLDCANQ IGTFGNSTDK LDMPVDLTTA LDECLDYFSQ LCEIEDLAGQ  360
FDEVVNWTRQ PDESINWPNQ HGVPLIEGST KAMNGATNYD TNFHGYEQNP ESSLCYYNGG  420
MQSMQPYNYN ATFQNIASQS ENVQQRVSLP TLPPPVDEFQ TNHYNNMLQN PSYNRII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G55690.1	7e-20	M-type_MADS family protein