PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX81024.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family GRF
Protein Properties Length: 604aa    MW: 66245.6 Da    PI: 9.034
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX81024.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC76.72.4e-24217261145
         WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                 d+epgrCrRtDGKkWRCsr+++ ++k+CErH++rgr+rsrk++e 
  RDX81024.1 217 DPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEG 261
                 79****************************************985 PP

2QLQ63.45.8e-22146182137
         QLQ   1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 
                 ++FT++Q+++L++Q+l+yKy+ an+PvP++Ll +i+k
  RDX81024.1 146 GPFTPSQWMELEHQALIYKYITANVPVPSHLLIPIKK 182
                 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence    Length: 604 aa     Download sequence    
MDLGGVDLDG LVGSDTASAG FVPLASDPET KHKWYGSGFL KQERSGATED DYWRSSKLAK  60
THNHDHDAAD ISASKAMLFH NMNNSLLRSN APQMLSFSSQ KSEPLVPDKA SPNATFPYSL  120
HSLSSYNRNT GYSSGNMHGM LTGARGPFTP SQWMELEHQA LIYKYITANV PVPSHLLIPI  180
KKALESAGFF NFSHALLRPN HAMGWGGFHL GFSNSTDPEP GRCRRTDGKK WRCSRDAVVD  240
QKYCERHMNR GRHRSRKPVE GQSGHALTTS KLLPTTTNNN NNNNNLLAAP SNTLTFAQQE  300
RKNMHPLPSD SSAAPTTINR MIMNSKENGS ETDALPVLPA TLELKPKENP FVVHKQQIPY  360
ADSSRSEFGI VTSDSLLNPS QKSSTLLSSR SFGSSRTTSN QETDSHHSLR QFIDDWPKTQ  420
SSRTWQELDM QMQSERTELS ISIPMTSSDF MSSTSSPTND KVTLSPLRLS RELDPIQMGL  480
GVGNAMNESN SGRQANWIPI TWESSMGGPL GEVLNLSNNN GNDHCANNNS ALNLMTDGWD  540
NSPSLGSSPT GVLQKTAFGS LSNSSAGSSP RAENKTQEGA RQHAHGNIIS KQHFLSKKKV  600
LKLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22840.11e-95GRF family protein