PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX81024.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

GRF

Protein Properties

Length: 604aa MW: 66245.6 Da PI: 9.034

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX81024.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.7	2.4e-24	217	261	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr+++ ++k+CErH++rgr+rsrk++e RDX81024.1 217 DPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEG 261 79****************************************985 PP
2	QLQ	63.4	5.8e-22	146	182	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+++L++Q+l+yKy+ an+PvP++Ll +i+k RDX81024.1 146 GPFTPSQWMELEHQALIYKYITANVPVPSHLLIPIKK 182 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 604 aa Download sequence
MDLGGVDLDG LVGSDTASAG FVPLASDPET KHKWYGSGFL KQERSGATED DYWRSSKLAK 60 THNHDHDAAD ISASKAMLFH NMNNSLLRSN APQMLSFSSQ KSEPLVPDKA SPNATFPYSL 120 HSLSSYNRNT GYSSGNMHGM LTGARGPFTP SQWMELEHQA LIYKYITANV PVPSHLLIPI 180 KKALESAGFF NFSHALLRPN HAMGWGGFHL GFSNSTDPEP GRCRRTDGKK WRCSRDAVVD 240 QKYCERHMNR GRHRSRKPVE GQSGHALTTS KLLPTTTNNN NNNNNLLAAP SNTLTFAQQE 300 RKNMHPLPSD SSAAPTTINR MIMNSKENGS ETDALPVLPA TLELKPKENP FVVHKQQIPY 360 ADSSRSEFGI VTSDSLLNPS QKSSTLLSSR SFGSSRTTSN QETDSHHSLR QFIDDWPKTQ 420 SSRTWQELDM QMQSERTELS ISIPMTSSDF MSSTSSPTND KVTLSPLRLS RELDPIQMGL 480 GVGNAMNESN SGRQANWIPI TWESSMGGPL GEVLNLSNNN GNDHCANNNS ALNLMTDGWD 540 NSPSLGSSPT GVLQKTAFGS LSNSSAGSSP RAENKTQEGA RQHAHGNIIS KQHFLSKKKV 600 LKLH

Sequence ? help Back to Top

Protein Sequence Length: 604 aa Download sequence

MDLGGVDLDG LVGSDTASAG FVPLASDPET KHKWYGSGFL KQERSGATED DYWRSSKLAK  60
THNHDHDAAD ISASKAMLFH NMNNSLLRSN APQMLSFSSQ KSEPLVPDKA SPNATFPYSL  120
HSLSSYNRNT GYSSGNMHGM LTGARGPFTP SQWMELEHQA LIYKYITANV PVPSHLLIPI  180
KKALESAGFF NFSHALLRPN HAMGWGGFHL GFSNSTDPEP GRCRRTDGKK WRCSRDAVVD  240
QKYCERHMNR GRHRSRKPVE GQSGHALTTS KLLPTTTNNN NNNNNLLAAP SNTLTFAQQE  300
RKNMHPLPSD SSAAPTTINR MIMNSKENGS ETDALPVLPA TLELKPKENP FVVHKQQIPY  360
ADSSRSEFGI VTSDSLLNPS QKSSTLLSSR SFGSSRTTSN QETDSHHSLR QFIDDWPKTQ  420
SSRTWQELDM QMQSERTELS ISIPMTSSDF MSSTSSPTND KVTLSPLRLS RELDPIQMGL  480
GVGNAMNESN SGRQANWIPI TWESSMGGPL GEVLNLSNNN GNDHCANNNS ALNLMTDGWD  540
NSPSLGSSPT GVLQKTAFGS LSNSSAGSSP RAENKTQEGA RQHAHGNIIS KQHFLSKKKV  600
LKLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	1e-95	GRF family protein