PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX80962.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family MYB
Protein Properties Length: 353aa    MW: 39935.4 Da    PI: 5.2391
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX80962.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.31.1e-154188148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g WT+eEd +l+ +++++G+ +W+  ++  g+ R++k+c++rw++yl
       RDX80962.1 41 KGTWTPEEDRKLIAYITRYGTWNWRQLPKFAGLARCGKSCRLRWLNYL 88
                     799*******************************************97 PP

2Myb_DNA-binding60.24.5e-1994138147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+ T+eE+e++++++++lG++ W+ Ia +++ gRt++++k++w++ 
       RDX80962.1  94 RGNYTEEEEEIIIKLHEKLGNK-WSVIATHLP-GRTDNEIKNHWHTT 138
                      899*******************.*********.***********986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MIRGDNIEHH LFLIVCLSGK CIPNITEMVR TPSRDTSGLQ KGTWTPEEDR KLIAYITRYG  60
TWNWRQLPKF AGLARCGKSC RLRWLNYLRP DIKRGNYTEE EEEIIIKLHE KLGNKWSVIA  120
THLPGRTDNE IKNHWHTTLK KRLGKNEVPT NENVKATKSN SSGSEQDTDS IQNNGSFHGL  180
SPTTSKVSDS DPLSPHVSSS EFSSSTSDYT TAATNENLLG EDGFHFVNEN LWAESYVDKI  240
FHAPIQDSDK GDHFHGLDAA GAMHPWALLE CPLSSCNENM VMDNEHFGFL EAIEPTSGSF  300
WTEPYVTDIS PVQNELLVPF PLVNESVEYF SSMYDADLWC QNNSHDLHGS LFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.11e-51MYB family protein