PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX80962.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MYB | ||||||||
Protein Properties | Length: 353aa MW: 39935.4 Da PI: 5.2391 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.3 | 1.1e-15 | 41 | 88 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+ +++++G+ +W+ ++ g+ R++k+c++rw++yl RDX80962.1 41 KGTWTPEEDRKLIAYITRYGTWNWRQLPKFAGLARCGKSCRLRWLNYL 88 799*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 60.2 | 4.5e-19 | 94 | 138 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T+eE+e++++++++lG++ W+ Ia +++ gRt++++k++w++ RDX80962.1 94 RGNYTEEEEEIIIKLHEKLGNK-WSVIATHLP-GRTDNEIKNHWHTT 138 899*******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 353 aa Download sequence |
MIRGDNIEHH LFLIVCLSGK CIPNITEMVR TPSRDTSGLQ KGTWTPEEDR KLIAYITRYG 60 TWNWRQLPKF AGLARCGKSC RLRWLNYLRP DIKRGNYTEE EEEIIIKLHE KLGNKWSVIA 120 THLPGRTDNE IKNHWHTTLK KRLGKNEVPT NENVKATKSN SSGSEQDTDS IQNNGSFHGL 180 SPTTSKVSDS DPLSPHVSSS EFSSSTSDYT TAATNENLLG EDGFHFVNEN LWAESYVDKI 240 FHAPIQDSDK GDHFHGLDAA GAMHPWALLE CPLSSCNENM VMDNEHFGFL EAIEPTSGSF 300 WTEPYVTDIS PVQNELLVPF PLVNESVEYF SSMYDADLWC QNNSHDLHGS LFQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 1e-51 | MYB family protein |