PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX80736.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 347aa MW: 38537 Da PI: 4.7695 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.6 | 1.5e-18 | 62 | 111 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y GVr+++ +grWvAeI+d ++ r +lg+++tae+Aa+a+++a++ l+g RDX80736.1 62 RYIGVRQRP-SGRWVAEIKDtI----QNIRLWLGTYDTAEDAARAYDEAARLLRG 111 799******.7*********33....35***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 347 aa Download sequence |
MLLCTKAKPS LVNKNMASKR KRCQGEGGEK SSEEGNIEWE QLREEAASMA AAILGARIAK 60 KRYIGVRQRP SGRWVAEIKD TIQNIRLWLG TYDTAEDAAR AYDEAARLLR GANTRTNFFS 120 SQSSPYSPAL PPKIAKLLLL RLKARNVTSS CMDMVTTTFP SNHCEHETKV EPEPQSEPES 180 HYGNFFDMVG NVVVEESYYG GASYSSSAMT TCDYSCGTTN EESSNQEGSG GDFRFGYHCA 240 DNVFGENNQI VSGKGEFQDC DVGITDFQFL NTAGALSYPF SPFEIAEEMV GPIEEEKYDV 300 DNSPLGRETF RMKYERKLSA CLYTLIGVSE CLRLQVGAEN GKELENF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 4e-14 | ERF family protein |