PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX80730.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 754aa MW: 85606.8 Da PI: 8.3054

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX80730.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.5	7.2e-14	8	53	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l RDX80730.1 8 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 53 78***************************.**********986 PP
2	Myb_DNA-binding	33.2	1.2e-10	60	103	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l RDX80730.1 60 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 103 68***************99.****8..********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 754 aa Download sequence
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT 60 EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACVKD ENYEPGDDPR 120 KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TKGKKAKRKA REKQLEEARR 180 LASLQKKREL KAAGIDIRQR KRKRKGIDYN AEIPFEKRPP PGFFDVTDED RPVEQPKFPT 240 TIEELEGKRR VDVEAQLRKQ DIAKNKIAQR QDVPSAILHA NKLNDPETVR KRSKLMLPPP 300 QISDQELDEI AKLGYASDLA GSQELAEGGG ATRALLANYA QTPGQGMTPL RTPQRTPSSK 360 GDAIMMEAEN LARLRESQTP LLGGENPELH PSDFSGVTLK KKEIQTPNPL LTPSATPGGA 420 GLTPRIGMTP TKDGFSFSMT PKGTPLRDEL HINEDMNMHD STKLELQRQA DMRRSLRSGL 480 GSLPQPKNEY QIVMQPVPED TEEPEVKIEE DMSDRIAREK AEEEARQQAL LRKQSKVLQR 540 ELPRPPAASL ELIRNSLMRA DGDKSSFVPP TSIEQADEMI RRELLTLLEH DNAKYPLDEK 600 VTKEKKKGAK RAVNGSAVPV IEDFQEDEMK DADKLVKEEA QYLCAAMGHE SEPLDEYIEA 660 HRTCLNDVMY FPTRNAYGLS SVAGNMEKLA ALQNEFQNVR NKLDDGKEKM VRLEKKVMVL 720 TQGYEMRVKK SLWPQIEATF KQMNIAATEL ECFK

Sequence ? help Back to Top

Protein Sequence Length: 754 aa Download sequence

MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT  60
EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACVKD ENYEPGDDPR  120
KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TKGKKAKRKA REKQLEEARR  180
LASLQKKREL KAAGIDIRQR KRKRKGIDYN AEIPFEKRPP PGFFDVTDED RPVEQPKFPT  240
TIEELEGKRR VDVEAQLRKQ DIAKNKIAQR QDVPSAILHA NKLNDPETVR KRSKLMLPPP  300
QISDQELDEI AKLGYASDLA GSQELAEGGG ATRALLANYA QTPGQGMTPL RTPQRTPSSK  360
GDAIMMEAEN LARLRESQTP LLGGENPELH PSDFSGVTLK KKEIQTPNPL LTPSATPGGA  420
GLTPRIGMTP TKDGFSFSMT PKGTPLRDEL HINEDMNMHD STKLELQRQA DMRRSLRSGL  480
GSLPQPKNEY QIVMQPVPED TEEPEVKIEE DMSDRIAREK AEEEARQQAL LRKQSKVLQR  540
ELPRPPAASL ELIRNSLMRA DGDKSSFVPP TSIEQADEMI RRELLTLLEH DNAKYPLDEK  600
VTKEKKKGAK RAVNGSAVPV IEDFQEDEMK DADKLVKEEA QYLCAAMGHE SEPLDEYIEA  660
HRTCLNDVMY FPTRNAYGLS SVAGNMEKLA ALQNEFQNVR NKLDDGKEKM VRLEKKVMVL  720
TQGYEMRVKK SLWPQIEATF KQMNIAATEL ECFK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	205	KKRELKAAGIDIRQRKRKRK
2	200	205	RKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	0.0	MYB family protein