PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX80534.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family HD-ZIP
Protein Properties Length: 817aa    MW: 89075 Da    PI: 6.2154
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX80534.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.14.7e-21122177156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 +++ +++t++q++eLe+lF+++++p++++r eL+++l+L++rqVk+WFqNrR+++k
  RDX80534.1 122 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSRRLNLETRQVKFWFQNRRTQMK 177
                 688999***********************************************999 PP
2START207.64.7e-653335571206
                 HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS
       START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 
                 ela++a++elvk+a+ +ep+W +s     e++n +e+++++++  +     + +ea+r +g+v+ ++  lve+l+d++ +W+e+++    + +t evis
  RDX80534.1 333 ELALAAMDELVKMAQTGEPLWIRSLeggrEILNHEEYTRTITPCIGlrpngFVSEASRQTGMVILNSLALVETLMDSN-RWSEMFPymiaRTSTAEVIS 430
                 5899*************************************999989***9***************************.******************** PP

                 TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXH CS
       START  87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlph 178
                 +g      galqlm aelq+lsplvp R++ f+R+++q+ +g w++vdvS+ds ++ +  + +v +++lpSg+++++++ng+skvtwveh++++++++h
  RDX80534.1 431 NGingtrnGALQLMHAELQVLSPLVPvREVNFLRFCKQHAEGLWAVVDVSIDSIRETSGAPTFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVH 529
                 ********************************************************999**************************************** PP

                 HHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 179 wllrslvksglaegaktwvatlqrqcek 206
                 +l+r+l++sg+ +ga++wva lqrqce+
  RDX80534.1 530 QLYRPLLSSGMGFGAQRWVAILQRQCEC 557
                 **************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 817 aa     Download sequence    
MSFGGFLENK QSGGGGRIVA DIPYSNGSNH SDSDIMPSGA ISQPRLATPT LAKSMFNSPG  60
LSLALQSDID GQGDVNRLMP ENFEQNGLRR NREEEHESRS GSDNMDGASG DDFDAADNPP  120
RKKRYHRHTP QQIQELESLF KECPHPDEKQ RLELSRRLNL ETRQVKFWFQ NRRTQMKTQL  180
ERHENSLLRQ ENDKLRAENM SMREAMRNPI CTNCGGPAMI GEISLEEQHL RIDNARLKDE  240
LDRVCALAGK FLGRPISSLT SSIGPPLPNS SLELGVGSNG FGGLNTVPST LPDFGVGISS  300
PLAMVSPSSR PTTATVVSTP GFDRSVERSI VLELALAAMD ELVKMAQTGE PLWIRSLEGG  360
REILNHEEYT RTITPCIGLR PNGFVSEASR QTGMVILNSL ALVETLMDSN RWSEMFPYMI  420
ARTSTAEVIS NGINGTRNGA LQLMHAELQV LSPLVPVREV NFLRFCKQHA EGLWAVVDVS  480
IDSIRETSGA PTFVNCRRLP SGCVVQDMPN GYSKVTWVEH AEYDESQVHQ LYRPLLSSGM  540
GFGAQRWVAI LQRQCECLAI LMSSAVPARE HSAIGTGGRR SMLKLAQRMT NNFCAGVCAS  600
TVHKWNKLNV GNVGEDVRVM TRKSVDDPGE PPGIVLSAAT SVWLPVSAQR LFDFLRDERL  660
RSEWDILSNG GPMQEMAHIA KGQDHANCVS LLRASAMNAN QSSMLILQET CTDASGSLVV  720
YAPVDIPAMH VVMNGGDSAY VALLPSGFAI VPDGSGGDDH GGGASQQRAG GCLLTVAFQI  780
LVNSLPTAKL TVESVETVNN LISCTVQKIK AALHCES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein