PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX80327.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HD-ZIP

Protein Properties

Length: 320aa MW: 36577.6 Da PI: 5.2377

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX80327.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	64.2	1.8e-20	105	158	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++++eq++ Le+ Fe+++++ +++++LAkklgL+ rqV vWFqNrRa++k RDX80327.1 105 KKHRLSSEQVHLLEKSFEEENKLEPDRKAQLAKKLGLQPRQVAVWFQNRRARWK 158 67889************************************************9 PP
2	HD-ZIP_I/II	133.4	8.5e-43	104	196	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekk+rls+eqv+lLE+sFeee+kLep+rK++la++LglqprqvavWFqnrRAR+ktkqlE+dy++Lk++yd+l ++ +++ ke+e+L++e+++ RDX80327.1 104 EKKHRLSSEQVHLLEKSFEEENKLEPDRKAQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKSSYDTLLSSYDSVMKENEKLKSEVAS 196 69**************************************************************************************99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
ALKSFNNEGS AIKSRGIRSN KFSRRRHLQR HRECVDKTQN REEKLAGKSS SGDGGCVGPW 60 FQKGATTVVG RSMLSMEEAS KRRPFFTSPD ELYDEEYYEK QLPEKKHRLS SEQVHLLEKS 120 FEEENKLEPD RKAQLAKKLG LQPRQVAVWF QNRRARWKTK QLERDYDVLK SSYDTLLSSY 180 DSVMKENEKL KSEVASLNEK LQVQAKEVPE EPLYDKKVDP LPVDDDMAPI FSTRVEDHLS 240 SGSVGSAVVD EGSPQLVLDS VDSYFPADNY GGCVGPVERV QSEEEEGSDD GRSYMMDVFV 300 VSETEHQSHE GWWSNMYYVG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	153	161	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	4e-75	HD-ZIP family protein