PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX79912.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family MYB
Protein Properties Length: 200aa    MW: 23271.1 Da    PI: 7.5448
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX79912.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.91.9e-171663148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT eEd++l+++++ +G g W++ a+  g++Rt+k+c++rw++yl
       RDX79912.1 16 KGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYL 63
                     79********************************************97 PP

2Myb_DNA-binding55.71.1e-1769112146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T+eE++l+ ++++++G++ W++Ia++++ gRt++++k++w++
       RDX79912.1  69 RGNITPEEQLLIMELHAKWGNR-WSKIAKHLP-GRTDNEIKNYWRT 112
                      7999******************.*********.***********96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MDKKLCNTSQ DPEVRKGPWT MEEDLILINY IANHGEGVWN SLAKAAGLKR TGKSCRLRWL  60
NYLRPDVRRG NITPEEQLLI MELHAKWGNR WSKIAKHLPG RTDNEIKNYW RTRIQKHIKQ  120
AESFQQQSNS EINDHQARTS QVSTMAEPME TYSPPCYQGM LDPFSTQFPT NPDHSSSCTN  180
DNNNYWSMED IWSMQLLNGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27810.12e-89MYB family protein