PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX79293.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HB-PHD

Protein Properties

Length: 1118aa MW: 123761 Da PI: 4.7652

Description

HB-PHD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX79293.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	41.1	2.9e-13	715	761	10	56
HHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 10 eqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++L + F++n+yp+++++e+LA+++gL+ +qV WF N R + RDX79293.1 715 AAVQRLHKSFKENQYPDRTTKEKLAQEIGLNYQQVAKWFDNNRWSFR 761 56899**************************************8766 PP
2	PHD	36.3	1.2e-12	364	419	1	51
SBTTTSS..TCTTSSEEEBSS.SSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS PHD 1 rCkvCgk..sdeegelvlCdg.CkewfHlkClglkleseekpeg..ewlCeeCkek 51 +C+ C++ ++++++lCdg C++ fH+ Cl ++l +e++p g wlC+ C++k RDX79293.1 364 FCAKCQSkeLSTNNDIILCDGvCDRGFHQLCLVPPLLTEDIPPGdeGWLCPGCDCK 419 699*977777****77****************9999*****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1118 aa Download sequence
LLASHLDYSG GCCGGACFLR PMASPTGELT SCKDGTAERM GTEQCELSEK TQIGSEGLER 60 EQRDLGTALT GSVIDEKTNQ VSANVVENSV ILLPAPPQHD FEKSCQSVEG SCLHQSAIEQ 120 VSVHLPSDQT ENKGQLMSEN VQNEPVESTP AFVVEGQMQS SPAQANVSSV NELLDPPSGD 180 VVNNISSNCS ERMSNSPTHL QLRHRGKRNS KLLKKKYMLR SLGSSDRALR SKTIEKPKEP 240 EPNSNLVDGN NDGVKRKSRR KKKKRREEGI TDQFSRIRSH LRYLLNRISY EKSLIDAYSG 300 EGWKGYSMEK LKPEKELQRA KSEILRRKLK IRDLFQNLDS LCAEGKLPES LFDSEGEIDS 360 EDIFCAKCQS KELSTNNDII LCDGVCDRGF HQLCLVPPLL TEDIPPGDEG WLCPGCDCKD 420 DCMDLVNDSF GTSLSLSDTW ERVFPEAATA TGNNMDSNLG LPSDDSDDDD YNPNGPEDVK 480 VEGDESSSDE SEYASASEKL EGLHEDQCLG LPSEDSSDGD YDPNAPDVDC KVNEETSSSD 540 FTSDSEDLAA AIEDNMSPGQ DGDIRSASLD DVKYLKSSSK QKGKVGKKLT MADELSSLLE 600 PDSGQEDSTP VSGKRRVERL DYKKLYDETY CSDTSDDEDW TATATPSREK KLTDNVTPVS 660 PNGNASNNSM HIPKRNKNKV ENTNNSHTKS LDGCVKSGSM DKKSGSSAHK RLGEAAVQRL 720 HKSFKENQYP DRTTKEKLAQ EIGLNYQQVA KWFDNNRWSF RHSSQMETNS GRNASQRAAV 780 GGAETEGEKE YELMSSEVSG EKSKTPSSRK RKHLSEPEAH EARLDINGSS ATISTVSQEL 840 ASTEMDLEVD ENDLKAAGAE LFTHGGRRGI RMNGWLIESR RHSILNSSTL QEWEQKLETS 900 HLPEMVFGEN TLILKHLSSG TKIHFNAFDA LRGWKQEALP PVEVPAAAQW KFRSKPSQQV 960 IPDYDYTFTT PYCGSGTIEI DRDLNGREIS KETSDIHWED CKDQIDVVAL ASKEPILFYD 1020 EVVLYEDELA DNGASLLTVK VLRVDGVLIR LRETRMHCVF GGSTNPIILR ESCWRESTFQ 1080 ALSAKGHPID SAAYGDPSII SQRLPIIMHT TQKLVISS

Sequence ? help Back to Top

Protein Sequence Length: 1118 aa Download sequence

LLASHLDYSG GCCGGACFLR PMASPTGELT SCKDGTAERM GTEQCELSEK TQIGSEGLER  60
EQRDLGTALT GSVIDEKTNQ VSANVVENSV ILLPAPPQHD FEKSCQSVEG SCLHQSAIEQ  120
VSVHLPSDQT ENKGQLMSEN VQNEPVESTP AFVVEGQMQS SPAQANVSSV NELLDPPSGD  180
VVNNISSNCS ERMSNSPTHL QLRHRGKRNS KLLKKKYMLR SLGSSDRALR SKTIEKPKEP  240
EPNSNLVDGN NDGVKRKSRR KKKKRREEGI TDQFSRIRSH LRYLLNRISY EKSLIDAYSG  300
EGWKGYSMEK LKPEKELQRA KSEILRRKLK IRDLFQNLDS LCAEGKLPES LFDSEGEIDS  360
EDIFCAKCQS KELSTNNDII LCDGVCDRGF HQLCLVPPLL TEDIPPGDEG WLCPGCDCKD  420
DCMDLVNDSF GTSLSLSDTW ERVFPEAATA TGNNMDSNLG LPSDDSDDDD YNPNGPEDVK  480
VEGDESSSDE SEYASASEKL EGLHEDQCLG LPSEDSSDGD YDPNAPDVDC KVNEETSSSD  540
FTSDSEDLAA AIEDNMSPGQ DGDIRSASLD DVKYLKSSSK QKGKVGKKLT MADELSSLLE  600
PDSGQEDSTP VSGKRRVERL DYKKLYDETY CSDTSDDEDW TATATPSREK KLTDNVTPVS  660
PNGNASNNSM HIPKRNKNKV ENTNNSHTKS LDGCVKSGSM DKKSGSSAHK RLGEAAVQRL  720
HKSFKENQYP DRTTKEKLAQ EIGLNYQQVA KWFDNNRWSF RHSSQMETNS GRNASQRAAV  780
GGAETEGEKE YELMSSEVSG EKSKTPSSRK RKHLSEPEAH EARLDINGSS ATISTVSQEL  840
ASTEMDLEVD ENDLKAAGAE LFTHGGRRGI RMNGWLIESR RHSILNSSTL QEWEQKLETS  900
HLPEMVFGEN TLILKHLSSG TKIHFNAFDA LRGWKQEALP PVEVPAAAQW KFRSKPSQQV  960
IPDYDYTFTT PYCGSGTIEI DRDLNGREIS KETSDIHWED CKDQIDVVAL ASKEPILFYD  1020
EVVLYEDELA DNGASLLTVK VLRVDGVLIR LRETRMHCVF GGSTNPIILR ESCWRESTFQ  1080
ALSAKGHPID SAAYGDPSII SQRLPIIMHT TQKLVISS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	256	264	RKSRRKKKK
2	256	267	RKSRRKKKKRRE
3	259	270	RKSRRKKKKRRE
4	259	265	RRKKKKR
5	260	265	RKKKKR
6	260	271	RKSRRKKKKRRE
7	260	266	RRKKKKR
8	261	266	KKKKRR
9	262	267	KKKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19510.1	6e-93	HB-PHD family protein