PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX79100.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MYB | ||||||||
Protein Properties | Length: 300aa MW: 34243.2 Da PI: 5.9704 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.6 | 5e-17 | 24 | 71 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+ eEd+ll ++++ +G g+W++ a + g++Rt+k+c++rw++yl RDX79100.1 24 RGPWSVEEDDLLTNYIANHGEGRWNLLAVRSGLRRTGKSCRLRWLNYL 71 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.1 | 1.3e-15 | 77 | 120 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE +l+ +++ ++G++ W++Ia+ ++ gRt++++k++w++ RDX79100.1 77 RGNLTSEEKLLIFQLHSKWGNR-WSKIAQQLP-GRTDNEIKNYWRT 120 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence |
MRLAMSTPSK SIMCSSEDDN ELRRGPWSVE EDDLLTNYIA NHGEGRWNLL AVRSGLRRTG 60 KSCRLRWLNY LKPDVKRGNL TSEEKLLIFQ LHSKWGNRWS KIAQQLPGRT DNEIKNYWRT 120 RIQKQAKYVK FETHRTGFLE LVKGLQMTTR CLQKAQEESS PSPMSIQDQA TPFPFDGASH 180 YSSFGIGTAP TTQITSQGGP YYLNQHEQNS DSDHNNGSCT TSQFQALDGC DFGICSYDGY 240 SINNSAYDLD PFNLTTTMIA EDLELPVIDC QLSETNLLNK EFTCSTWSMD ELWQFGNIQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 4e-65 | MYB family protein |