PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX79040.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

Trihelix

Protein Properties

Length: 304aa MW: 34095.7 Da PI: 10.2141

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX79040.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	61.9	1.5e-19	35	134	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikeg.........ekkrtsessstcpyfdql 85 +Wt +e+ aLi+a+re++ +l+r++lk+++W+ev++++ + + ++++qC++k+e+l+kry+ + ++ ++++++ s+s++++f+++ RDX79040.1 35 CWTPEETAALIDAYREKWYSLGRTNLKATHWQEVADAVtvqcpNASPAAKTAVQCRHKMEKLRKRYRTEIQRlrslpvprlNNNNNNASTSSWVHFKSM 133 8******************************************************************99887222222222333445666777777777 PP trihelix 86 e 86 + RDX79040.1 134 D 134 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MASPSSPTDS NPPSAVPLPL PAPPSSSSRR LPPPCWTPEE TAALIDAYRE KWYSLGRTNL 60 KATHWQEVAD AVTVQCPNAS PAAKTAVQCR HKMEKLRKRY RTEIQRLRSL PVPRLNNNNN 120 NASTSSWVHF KSMDSMEKGP SKPEPNNNLN FIEQEDNEDD DLYEEFKNAP GSNTRSLNKL 180 YKNGPAFRIR IPAGVSVAQH PSSKFFNAPS PGGGGAMPRA AKRERERDAL AEMVGAIKVL 240 RDGFVRMEQM KMEMAREIET MRMEMEVKRT EMILDSQQRI VEAFARAVSH KRTKPKSTPS 300 PSQP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	1e-69	Trihelix family protein