PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX78873.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family Trihelix
Protein Properties Length: 541aa    MW: 62457.3 Da    PI: 6.5505
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX78873.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix54.92.4e-17101175286
    trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 Wt++evlaL+++r++me+++ +       We+vs+k++e g++rs+++Ckek+e+ ++++ +i+ g++++     ++++++++le
  RDX78873.1 101 WTNDEVLALLRIRSSMESWFPEL-----TWEHVSRKLAEVGYKRSAEKCKEKFEEESRYFSNINYGKNNN-----NNYRFLSELE 175
                 ********************987.....9***********************************999984.....4677888776 PP
2trihelix92.93.1e-29388474186
    trihelix   1 rWtkqevlaLiearremeerlrrgk..lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 rW+k+evlaLi++r    ++ +++k   k plWe++s+ m+e g++r++k+Ckekwen+nk+++k+k+ +kkr s +s+tcpyf+ql 
  RDX78873.1 388 RWPKDEVLALIKLRCTSVNNNNEEKegNKVPLWERISQGMSELGYKRNAKRCKEKWENINKYFRKTKDVNKKR-SLDSRTCPYFHQLS 474
                 8*************877777776433499*******************************************8.9999********95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    
MFDGVPDQFH QFITPRTSLP LHLPFPLHAS GTPNTTFHTN FDPYNPSHHH HHHQLPSLQP  60
NHLLHPLHHK DEEKEENSTV PMNFEIQRDQ RQQLPELVDP WTNDEVLALL RIRSSMESWF  120
PELTWEHVSR KLAEVGYKRS AEKCKEKFEE ESRYFSNINY GKNNNNNYRF LSELEQLYQA  180
GGGDHQAGTE EKSEEEKMGQ HASEQGLDAS GTKQNDDAPE KTKERKRKRP DRFEMFKGFC  240
ESIVHKMMAQ QEEMHNKLLE DMVKRDQDKF TREEAWKKQE MEKMNKELEM MAREQAIAGD  300
RQANIIQILN NFSSTSPATP NNNANSNSNL KQNPNPSQNT TPTTQNPTSK DTLQVIPSSS  360
STSALVPQNP SSCSLVEINN EKEDVGRRWP KDEVLALIKL RCTSVNNNNE EKEGNKVPLW  420
ERISQGMSEL GYKRNAKRCK EKWENINKYF RKTKDVNKKR SLDSRTCPYF HQLSTLYNEG  480
KLVLQSEKSQ SHLNENPEQV PPDQTQPDQS SSQVGSAAFS VVDHGGEKPL MQVPSLDFDH  540
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28300.11e-58Trihelix family protein