PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX78247.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | bHLH | ||||||||
Protein Properties | Length: 221aa MW: 25138.3 Da PI: 6.5108 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 17.5 | 7.7e-06 | 112 | 160 | 4 | 55 |
HHHHHHH.HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerEr.rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L+el+P + k + a +L ++Y++sLq RDX78247.1 112 SHSLAERvVRREKINEKMRYLQELVPGC----YKSMGMAVMLDVIIDYVQSLQ 160 688888845******************8....355999999999999999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MSKVESYTLT HQELIMPFSN NDNLLDQQPQ PQTVQTFTHS ENHPDLIPLI PSSTSAYSTK 60 YDHSSPPYST TGCAEKNKNL AGNKRKRNND RHKEKGNEVI HVRAKRGQAT DSHSLAERVV 120 RREKINEKMR YLQELVPGCY KSMGMAVMLD VIIDYVQSLQ QQIEFLSMKL SAASMYFDIS 180 NTEMDATEIM QRSAGTHEIQ EMEGIAGEGG ICYFNPTWPL Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25330.1 | 6e-49 | bHLH family protein |