PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX78109.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family MYB
Protein Properties Length: 307aa    MW: 35021.5 Da    PI: 5.1464
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX78109.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.91.2e-131459146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     +g+W +eEde l++ vk++G+++W++I ++  + Rt+k+c++rw +
       RDX78109.1 14 KGPWKAEEDEVLLNHVKKYGPRDWSSIRSKGLLQRTGKSCRLRWVN 59
                     79*************************8887799**********87 PP
2Myb_DNA-binding43.38.3e-1470109344
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                      +++ eE+   +++ +q+G++ W++Ia++++ gRt++++k++w
       RDX78109.1  70 KFSLEEERTVIELQAQFGNR-WARIASYLP-GRTDNDVKNFW 109
                      799*****************.*********.*********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MHGKKEHEEE YIRKGPWKAE EDEVLLNHVK KYGPRDWSSI RSKGLLQRTG KSCRLRWVNK  60
LRPNLKNGCK FSLEEERTVI ELQAQFGNRW ARIASYLPGR TDNDVKNFWS SRQKRLARIL  120
QTSATTPKSQ KNKTIVPSFL DVPTLEAPKF SSSSEGDPPS KPQLCSLPFI ENSVIKMASL  180
PDLIKSELPS CSDTSQVEQE FTLFESYKSI EQNQQIAFPQ IPELHNDLTF SMGSQDLLAR  240
IDEPCFIEDL IGPLDASEFG TFFEPPGSCR IVTWDAIDNS KDCDSFFDDF PVDMFDHMEP  300
PPSPSNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.14e-89MYB family protein