PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX77609.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 450aa MW: 50282 Da PI: 7.1414

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX77609.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.1	3e-16	120	165	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ RDX77609.1 120 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 165 899***************************.*********996 PP
2	Myb_DNA-binding	55.5	1.3e-17	172	215	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l +a++ +G++ W+ Iar ++ gRt++ +k++w+ RDX77609.1 172 RRAFSEEEEERLMQAHRIYGNK-WAMIARLFP-GRTDNAVKNHWHV 215 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MGSSKCCMIS TQQNQNAPTC YPFPSPSMGM VYADMMGSLS LATLSNNNAS SSQESYACGY 60 DTFPFMREFL SSNFEDCCDV GVGESDSDEK IKHGAKFNEE SNPNVSAKEV DSGHSKLCAR 120 GHWRPAEDSK LKELVALYGP QNWNLIAEKL EGRSGKSCRL RWFNQLDPRI NRRAFSEEEE 180 ERLMQAHRIY GNKWAMIARL FPGRTDNAVK NHWHVIMARK YREQSSAYRR RRMSQSVYRR 240 VEQNSSFVCS RDNSSATEPE PEPEPSPSHC LNLLHNGVAL TNNMAAFPSF HGGAGAGVVE 300 FGLNGSPQNM AGGREAMSNT PHVGLCAQAQ QAPFDFFSGG GSNESQHNHC QLSGFYPRYP 360 QQYLMAMQQV DNNFYSFLKS SSASTTRARE PSSSPPSDAV MRDKVVNRDP PEPPFFDFLG 420 LNEHEKGHID MMLSSKGCFG CGYRKTIYNE

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MGSSKCCMIS TQQNQNAPTC YPFPSPSMGM VYADMMGSLS LATLSNNNAS SSQESYACGY  60
DTFPFMREFL SSNFEDCCDV GVGESDSDEK IKHGAKFNEE SNPNVSAKEV DSGHSKLCAR  120
GHWRPAEDSK LKELVALYGP QNWNLIAEKL EGRSGKSCRL RWFNQLDPRI NRRAFSEEEE  180
ERLMQAHRIY GNKWAMIARL FPGRTDNAVK NHWHVIMARK YREQSSAYRR RRMSQSVYRR  240
VEQNSSFVCS RDNSSATEPE PEPEPSPSHC LNLLHNGVAL TNNMAAFPSF HGGAGAGVVE  300
FGLNGSPQNM AGGREAMSNT PHVGLCAQAQ QAPFDFFSGG GSNESQHNHC QLSGFYPRYP  360
QQYLMAMQQV DNNFYSFLKS SSASTTRARE PSSSPPSDAV MRDKVVNRDP PEPPFFDFLG  420
LNEHEKGHID MMLSSKGCFG CGYRKTIYNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	2e-72	MYB family protein