PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX77277.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MYB_related | ||||||||
Protein Properties | Length: 189aa MW: 22262.3 Da PI: 7.1966 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23 | 1.9e-07 | 8 | 43 | 11 | 47 |
HHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 11 llvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 l++++++ +G +tWk Ia + ++t+ q+ s+ qky RDX77277.1 8 LFLELHQIHG-RTWKNIAGDVVMTKTAAQVASHNQKY 43 8*********.55*********99*********9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MITIKSTLFL ELHQIHGRTW KNIAGDVVMT KTAAQVASHN QKYECRQKLS SEQEKKRTIH 60 DITLENDDQN ILEHQIMPQS RKLIRLVPPP DFQIQQRTPH FTNHCYSWIP IPNQPSLDFQ 120 IQHSIPPPDL QTQHRIPPPE LQIQQFPHFI DRYYSWISTP NQELPHHLDQ QMYCNSSGPV 180 RLDGHFIDI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09450.1 | 3e-10 | MYB_related family protein |