PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX76547.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 395aa MW: 44612.9 Da PI: 6.9469

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX76547.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.6	2e-12	220	267	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h ++Er+RR+++ ++f L l+P + +K +Ka++L A++Y+k+Lq RDX76547.1 220 QDHIIAERKRREKLSQRFIALSALVPGL-----QKTDKASVLGDAIKYLKQLQ 267 5799*********************9.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
GHTIPEIIFS PPHVLLGHWL KSSQVNVNCC ISPKIGKDIT LSSFDCRIGS LMEISSFRGL 60 PDMKEQEIIE DPTFFHQWHL SSIEEPNLQP IAATFGETLQ HHAFTYPDFN PKTSMETALD 120 DIERSTKHHK NIISWNPSKS AQTSETQFVS FPNPFSFVDS NHISPLGLVK AEDEMVCPII 180 NSTTPPDTIP QGNLGNHNYV FKACQEAKKI GTRSKLSQPQ DHIIAERKRR EKLSQRFIAL 240 SALVPGLQKT DKASVLGDAI KYLKQLQEKV RALEEEKNMR KNVESVVIVK KSQLSNDVNN 300 SSSEYDGSFD EILPEIEARF CERNVLIRVH CEKSKGVVEK TIHEIEKHHL KVTNSNTMTF 360 GRCALDITII AQMDVEFCMG VKDLVRNLRS AFTSF

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

GHTIPEIIFS PPHVLLGHWL KSSQVNVNCC ISPKIGKDIT LSSFDCRIGS LMEISSFRGL  60
PDMKEQEIIE DPTFFHQWHL SSIEEPNLQP IAATFGETLQ HHAFTYPDFN PKTSMETALD  120
DIERSTKHHK NIISWNPSKS AQTSETQFVS FPNPFSFVDS NHISPLGLVK AEDEMVCPII  180
NSTTPPDTIP QGNLGNHNYV FKACQEAKKI GTRSKLSQPQ DHIIAERKRR EKLSQRFIAL  240
SALVPGLQKT DKASVLGDAI KYLKQLQEKV RALEEEKNMR KNVESVVIVK KSQLSNDVNN  300
SSSEYDGSFD EILPEIEARF CERNVLIRVH CEKSKGVVEK TIHEIEKHHL KVTNSNTMTF  360
GRCALDITII AQMDVEFCMG VKDLVRNLRS AFTSF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	226	231	ERKRRE
2	227	232	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	4e-60	bHLH family protein