PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX76196.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 348aa MW: 38883.2 Da PI: 5.4743

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX76196.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.7	1.6e-11	108	171	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C............TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPk.as.........kapskKlsKaeiLekAveYIksLq 55 r++h +Er+RR+++N+ ++ Lr+l+P+ + +++ + a+i +v+YI++Lq RDX76196.1 108 RMSHITVERNRRKQMNENLSVLRSLMPSfYVkrwhlrltySTYMVQGDQASIIGGVVDYINELQ 171 89************************777*****99*******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MEPQKIPLMD DSLCDIFKDT EFEDTHFGGE DLFAILESLE EDLKDFPPIN NEAITSPTSK 60 ENEQNSRMVS QKVSISSSAP QDSETELEIS PKSKRQKLSP TSPEEPPRMS HITVERNRRK 120 QMNENLSVLR SLMPSFYVKR WHLRLTYSTY MVQGDQASII GGVVDYINEL QQVLQCLEAK 180 KQRKVHNDVL SPRLVSSPRP SPLSPRKPPL SPRINLPISP RTPQPCSPYK PRLQQGYLSP 240 TIANSPTSSA SSSINDNINE LVANSKSLIA DVEVKFSGPH VLLKTLSPPI PGQALRIISA 300 LEDLALEILH VNISTADETM LNSFTIKIGI ECQLSAEELA QQIQQTFC

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MEPQKIPLMD DSLCDIFKDT EFEDTHFGGE DLFAILESLE EDLKDFPPIN NEAITSPTSK  60
ENEQNSRMVS QKVSISSSAP QDSETELEIS PKSKRQKLSP TSPEEPPRMS HITVERNRRK  120
QMNENLSVLR SLMPSFYVKR WHLRLTYSTY MVQGDQASII GGVVDYINEL QQVLQCLEAK  180
KQRKVHNDVL SPRLVSSPRP SPLSPRKPPL SPRINLPISP RTPQPCSPYK PRLQQGYLSP  240
TIANSPTSSA SSSINDNINE LVANSKSLIA DVEVKFSGPH VLLKTLSPPI PGQALRIISA  300
LEDLALEILH VNISTADETM LNSFTIKIGI ECQLSAEELA QQIQQTFC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	108	119	RMSHITVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06120.1	1e-46	bHLH family protein