PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX75966.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family GRF
Protein Properties Length: 597aa    MW: 65491.6 Da    PI: 8.7796
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX75966.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC76.72.4e-24211255145
         WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                 d+epgrCrRtDGKkWRCsr+++ ++k+CErH++rgr+rsrk++e 
  RDX75966.1 211 DPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEG 255
                 79****************************************985 PP

2QLQ63.65.2e-22141177137
         QLQ   1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 
                 ++FT++Q+++L++Q+l+yKy+ an+PvP++Ll +i+k
  RDX75966.1 141 GPFTPSQWMELEHQALIYKYITANVPVPSHLLIPIRK 177
                 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence    Length: 597 aa     Download sequence    
MDLGVVGLEG LVGSETAAFA SDPQTKQKWY GSGLLKQERS GQDDDWRISK LPKTDDVPSS  60
AASKPMLFHH RNSMLRSNNA TLFSDPQMLT FSSPKSDPFL LDKPTANATL PFSYHQFSTY  120
TRNNTGYSSG SMHGALAGSR GPFTPSQWME LEHQALIYKY ITANVPVPSH LLIPIRKALD  180
SAGFCNFSTG LLRPNALGWG GFHLGFSNNT DPEPGRCRRT DGKKWRCSRD AVVDQKYCER  240
HMNRGRHRSR KPVEGQSGHA LTTTTTATTP SASSNSIVVP GSNNNTNTFA HQQPNNVSVH  300
HPHPHPHPHS SPANTINRMF MSNKENNNNA SERMQDGPGF PMLPPTLELK PKENNPFMIH  360
KQQIYDESSR INNEFGLVTS DSLLNPSQKR SFGSSSQKGS ESQQQHPLRH FIDDSPKPQS  420
HHHHHHHHRS GVWPELDMQP DRTQLSISIP ISSSDFMSFT TSSPSNEKLT LSPLRLSREL  480
DPIQMGLGVG SAQNESNTRQ ANWIPITWES SMGGPLGEVL NLSSSSNNIS NASDHQCGKN  540
TSALNLMKDG WDNSPPLGSS PTGVLQKTAF GSLSNSSAGS SPRAENNKEG ATLCNAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22840.14e-93GRF family protein