PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX75883.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 240aa MW: 25782.1 Da PI: 4.9352 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.4 | 2.6e-16 | 43 | 93 | 5 | 55 |
AP2 5 GVrwdkkrgr...WvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 GVr++ +r r Wv+eIr+p++ +kr++lg++ tae+Aa+a++ a+++l+g RDX75883.1 43 GVRYRGTRCRsgkWVSEIREPRK---TKRIWLGTYPTAEMAAAAYDVAALALKG 93 6666666655555*******843...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MDGNVNPFGN MPPPPIQVPD FVHSSSSSPT PTTSSPSPTP SAGVRYRGTR CRSGKWVSEI 60 REPRKTKRIW LGTYPTAEMA AAAYDVAALA LKGPDTPLNF PNSILSYPIP ASLSATDIRA 120 AAAAAAQGRI VSAAQESGRM ENPDSGQGLE RREEYIDEDE LLNMPNLLDD MARGMQLISL 180 LVAAGKVGTL ECSSDEISVS SREIFLALNT DRNLEGSFRP SAVNLCRHDA KFVPTVMTEC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 1e-29 | ERF family protein |