PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX75556.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | B3 | ||||||||
Protein Properties | Length: 492aa MW: 56256.3 Da PI: 9.1043 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 43.9 | 4.4e-14 | 43 | 126 | 10 | 99 |
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +l+ g ++lpk f++++++ s + l+ ++g +W+++ +k++g+++++kGWkeF+ L+ g + F+++g+s f v++f k RDX75556.1 43 SLADGEIRLPKYFTRKYENGM--SNPVFLKPPDGTEWKIYW--TKHDGETWFQKGWKEFATYYSLDHGHLLFFEYEGTSYF--DVHIFGK 126 4566789**********6554..445***************..*********************************99998..8888876 PP | |||||||
2 | B3 | 45 | 2e-14 | 259 | 345 | 5 | 98 |
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE- CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfr 98 ++++ + + l +p +f e++ ++++ + le ++grsW v + + ++ + +GW++F+++n+L++g ++ F+l+++ ++ ++v++f+ RDX75556.1 259 VMKPSFINGDYLKIPPQFSEQYLKITR--AVVLLEVLDGRSWPVIY--SASR----ICGGWQKFASENNLNVGNVCFFELIQKiQGLAFKVSIFQ 345 46788888999***********66633..4788889**********..6666....779**********************99999999999986 PP | |||||||
3 | B3 | 41.4 | 2.6e-13 | 408 | 488 | 15 | 98 |
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 r +p +f++++ +k+e+ ++++++ ++ vkl ++k++ + +l+ GW +F++ n+L+ gD+++F+l +r+e+ l+++vfr RDX75556.1 408 RPHVPSNFVRKYLLKEEKMMKIQFRK---KVSPVKLVFSKYGATGTLSCGWGSFARKNKLQLGDVCIFELLNREEALLHLHVFR 488 4579********99988766666555...9999***99********************************9999999****998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 492 aa Download sequence |
SEKSPFEFSP SGLISTSYDM TSSHNKQHLH AVVRFFKIIL GTSLADGEIR LPKYFTRKYE 60 NGMSNPVFLK PPDGTEWKIY WTKHDGETWF QKGWKEFATY YSLDHGHLLF FEYEGTSYFD 120 VHIFGKSAVE INYPSHGNHD GNSSIMQIID DSVEIVDEKF SCQKTRVKSR VLSLQPCEKM 180 KNNTTTNDER CPNGVNLHQD VQTRSTSSQE EKIIMKRKLD EDEGKSIFHT ECPKVEKLTS 240 TVLQKATTFR SDHPYFMLVM KPSFINGDYL KIPPQFSEQY LKITRAVVLL EVLDGRSWPV 300 IYSASRICGG WQKFASENNL NVGNVCFFEL IQKIQGLAFK VSIFQGADKP SCPVSQGGTS 360 SQRSSGLKSH FKSKDLTTIA LEEASKFTSE NPFFLVTLTC TKENIIRRPH VPSNFVRKYL 420 LKEEKMMKIQ FRKKVSPVKL VFSKYGATGT LSCGWGSFAR KNKLQLGDVC IFELLNREEA 480 LLHLHVFRGH SE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 3e-39 | B3 family protein |