PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX74498.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | TCP | ||||||||
Protein Properties | Length: 268aa MW: 29467.9 Da PI: 8.7523 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 129.8 | 2.6e-40 | 38 | 162 | 1 | 112 |
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.......... 88 aa+k+ +++++hTkv+gR+RRvR++a caar+F+L++eLG+++d++tieWLl+qa+pa++++tgt++++a+++ + s +ss+s+ ss+ RDX74498.1 38 AAVKRGSTKDRHTKVEGRGRRVRMPAACAARVFQLTRELGHKSDGETIEWLLRQAEPAVIAATGTGTIPANFTsLNISVRSSGSSLSSPsqffnrhins 136 58999*****************************************************************99976666666666444444455555555 PP TCP 89 ..kaaksaakskksqksaasalnlak 112 + ++ ++++s +a+s+ln+a RDX74498.1 137 tnYHTLAEDSRRFSFPDASSFLNVAS 162 54333333355555555555555555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MEGVHGHNRN VIRKPNFPLQ LLEKKDEVEE RTQPPSAAAV KRGSTKDRHT KVEGRGRRVR 60 MPAACAARVF QLTRELGHKS DGETIEWLLR QAEPAVIAAT GTGTIPANFT SLNISVRSSG 120 SSLSSPSQFF NRHINSTNYH TLAEDSRRFS FPDASSFLNV ASEEEGLGLE WKRRQEMISH 180 VGSCLSQSST ESVPAMMSGA DSLWAIPYAP SSATGIHFTN FSSLLTAQQV LPFSSSMLTE 240 TNHFGLLATL NAYSAQHHHR LHGDQTNN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69690.1 | 5e-46 | TCP family protein |