PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX74318.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | TCP | ||||||||
Protein Properties | Length: 173aa MW: 19176 Da PI: 9.8965 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 92.9 | 6.6e-29 | 40 | 115 | 8 | 83 |
TCP 8 hskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssas 83 ++++h+kv+gR RRv l+ +caar+F+L++eLG+++ ++ti WLl+qa+p+i+++t+t+ ss++ ++a+ ss s++ RDX74318.1 40 KKDRHSKVNGRERRVLLPPLCAARIFQLTRELGYKTHGETIGWLLRQAEPSIIAATSTQLSSSMVASASLSSPSKD 115 6999******************************************************777663332222222222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
MVHSTSSYSS SLLNEEKAMN FESRPPFKAI KAKRQPLKGK KDRHSKVNGR ERRVLLPPLC 60 AARIFQLTRE LGYKTHGETI GWLLRQAEPS IIAATSTQLS SSMVASASLS SPSKDKNIVA 120 LHADSINNDI KSEQEFLPLD FDLLATFNVE FSANEMAMLQ SLMTRVHGIS IAC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37000.1 | 9e-26 | TCP family protein |